Information for unigene UN00139
| FASTA Sequence |
| Unigene ID: UN00139 | Length: 1312 |
SSR | | AGGTACAGTTTACTCCCATTTCAAAACTCAAAACCCCCTCTCTCTCTCTCCCCCGAAACCCTAGAATCTGTGATCTTCAAACGGGA
GGAATCGGAACATGAGTCAGCCTCCTCCGTCCGCCGGCCGTGAGCTCGCGAACCCACCGTCCGACGGCATTTCGAATCTCAGATTC
TCCAACACAAGTGACCATCTCCTCGTTTCTTCATGGGATAAGAGTGTGAGATTGTACGATGTGAGCACCAATTCGTTGAAAGGAGA
GTTCCTACACGGCGGCGCAGTGCTCGATTGCTGTTTCCACGATGATTCCTCTGGTTTCAGCGTTGGCAGCGACAACAAAGTCAGAC
GGATTGTATTCAATGTTGGCAAAGAGGATGTTCTGGGGATGCGTGAAAAGCCTGTAAGATGTGTTGAGTATTCTTATGCCGCAGGG
CAAGTGATTACGGGATCTTGGGATAAAACAGTTAAGTGTTGGGATCCGAGAGGTGCAAGTGGGCCTGAACGGACTCAGGTGGGAAC
ATACATGCAACCAGAGCGTGTTTACTCTCTGTCTCTCGTTGGAAACCGTCTCGTTGTGGCAGCAGCAGGAAGGCATGTCAACATCT
ACGATCTCAGGAATATGTCTCAGCCTGAACAAAGAAGGGAGTCTTCACTAAAGTACCATACGAGATGTGTTCGTAGTTATCCTAAT
GGAACAGGGTATGCTCTTAGCTCTGTTGAAGGAAGAGTTGCGATGGAGTTCTTTGATCTGTCAGAGGCTGCTCAAGCTAAGAAATA
TGCTTTTAAGTGTCATCGGAAATCAGAGGCTGGAAGAGACATTGTTTACCCTGTAAATGCCATTGCTTTCCATCCAATTTATGGCA
CTTTTGCAACCGGAGGCTGTGACGGGTTTGTCAATATTTGGGATGGGAACAACAAGAAGAGGCTTTATCAGTATTCAAAGTACCCA
TCAAGTATAGCAGCACTGTCATTCAGTCGATATGGGCAGCTACTAGCTGTTGCTTCAAGTTACACTTTTGAAGAGGGGGAGAAATC
GCACGAGCCAGAAGCCATCTTTGTAAGAAACGTTAACGAAATCGAAGTGAAACCCAAACCCAAAGCATATCCAAATCCTGCGGCAT
AGTAAGGAAGAAACACAGAAGCATTCTCAACACAAGTTGGTCGTTTTCTTTACTAAGAGTGCCCCATAGATAATGAAAGTATGTCT
GGGCTTTTAATCTTTCTTTTGTCTGAGTGTATAAAGTAGTAGAAGTAAAGACAATGCTTTGTAGTTCGTTTTTTCAAAACATATTT
ATTACCCAAGAGATATTAGATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883194 hypothetical protein ARALYDRAFT_898343 [Arabidopsis lyrata subsp. lyrata] | 1665 | 3e-183 |
| NP_566644 cell cycle arrest protein BUB3 [Arabidopsis thaliana] | 1659 | 2e-182 |
| NP_175413 cell cycle arrest protein BUB3 [Arabidopsis thaliana] | 1584 | 8e-174 |
| XP_002527504 mitotic checkpoint protein bub3, putative [Ricinus communis] | 1584 | 8e-174 |
| XP_002891542 hypothetical protein ARALYDRAFT_474121 [Arabidopsis lyrata subsp. lyrata] | 1572 | 2e-172 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q1JQB2 Mitotic checkpoint protein BUB3 | 927 | 5e-099 |
| O43684 Mitotic checkpoint protein BUB3 | 927 | 5e-099 |
| Q9WVA3 Mitotic checkpoint protein BUB3 | 919 | 4e-098 |
| Q5RB58 Mitotic checkpoint protein BUB3 | 913 | 2e-097 |
| Q54DM1 Mitotic checkpoint protein bub3 | 806 | 5e-085 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LJN8 Mitotic checkpoint protein | 1659 | 1e-182 |
| B9SND5 Mitotic checkpoint protein bub3, putative | 1584 | 5e-174 |
| Q9C701 Mitotic checkpoint protein, putative | 1584 | 5e-174 |
| B9GI86 Predicted protein (Fragment) | 1562 | 2e-171 |
| B9HMY8 Predicted protein (Fragment) | 1562 | 2e-171 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G19590.1 WD-40 repeat family protein / mitotic checkpoint protein, putative | 1660 | 4e-185 |
| AT1G49910.1 WD-40 repeat family protein / mitotic checkpoint protein, putative | 1584 | 3e-176 |
| AT1G69400.1 transducin family protein / WD-40 repeat family protein | 564 | 5e-058 |
| AT1G80670.1 transducin family protein / WD-40 repeat family protein | 521 | 5e-053 |
| AT1G69400.2 transducin family protein / WD-40 repeat family protein | 428 | 3e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
| Software error:
can't close file: No space left on device at /var/www/cgi-bin/radish/EST/search.cgi line 576.
For help, please send mail to the webmaster (feibioinfolab@gmail.com), giving this error message
and the time and date of the error.
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