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Information for unigene UN00143
| FASTA Sequence |
| Unigene ID: UN00143 | Length: 978 |
SSR | | GGACAGGCAAGCTCCTTTCGAATTTCCTCTTAGTTCCAAACTCGATTTCGCATCTCTCCAGCGATTTCGTTAATAAGCATCAGTTT
TTCTCTCCCTTTTTTGATCGATCCTGAAATAGATGATCTTTTGTTGCATCTCTGTGATTGTGAAAACCCCTAAGTCTTTCAATATT
TTGTGATTTAGGTTCGTGATGATTTCCATTTCGTGATGAGTTCCGTAATAGAAATGTGAAAGCAACACTCTTGTTTTGTGTCTGGT
GTGTGTGTGTGATGTTAGGGATTCTCTTCTGAGAGAGAGAGCGAGACTAGGTAGGAGCAATGGGTTGGAAAGCTGCTGAGAAACTC
ATCAGACACTGGAAGATACTTCGCGGTGATAATGTAATGATTATCCGCGGGAAAGATAAGGGCGAGACTGGAGCCATTAAGCGTGT
CATCAGATCCCAGAATCGTGTCATTGTTGAAGGCAAGAATCTGATCAAGAAGCATATAAAGGGAGGTCCTGATCATGAAGGTGGGA
TTTTCACGGTAGAGGCTCCCCTTCACGCCTCAAATGTCCAAGTTGTTGATCCTGTCACCGGGAGGCCTTGTAAGGTTGGTGTGAAG
TACCTATAGGATGGTACAAAAGTAAGAGTGGCCAGAGGCACTGGCACATCTGGTTCCATTATTCCTCGCCCAGAGATTCTTAAGAT
AAGGACAACACCAAGACCCACTACAGCTGGCCCAAAGGACACACCAATGGAGTTTGTCTGGGAGCAGACATATGATGCTAAAACAG
GAAAGGGCACGCCTGATCTTTGAGTAAAACCTTCTTCCTAAAATGTTGATGCTCCCAGATGATTCTTCTTCTTTTTACATCCAGAT
TACAAGTTTGATTTAGTTCAAAGATTTGAGAAATGAGATGCTGTTGAACAAGCTTTGATTCTTTTTTCCGTTACTCTTATGAACGT
TTTCAAGGTGTCAAATAAAAACCTTATGGGAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_680212 50S ribosomal protein L24-like protein [Arabidopsis thaliana] | 817 | 4e-085 |
| XP_002878763 KOW domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 809 | 4e-084 |
| XP_002305718 predicted protein [Populus trichocarpa] | 742 | 2e-076 |
| XP_002532971 mitochondrial ribosomal protein L24, putative [Ricinus communis] | 730 | 5e-075 |
| ACU13829 unknown [Glycine max] | 713 | 5e-073 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZCR6 50S ribosomal protein L24 | 255 | 3e-021 |
| B6IRR7 50S ribosomal protein L24 | 253 | 5e-021 |
| Q68W89 50S ribosomal protein L24 | 253 | 5e-021 |
| Q4UMR8 50S ribosomal protein L24 | 252 | 6e-021 |
| C3PP96 50S ribosomal protein L24 | 251 | 8e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LT09 50S ribosomal protein L24 | 817 | 3e-085 |
| B9H2D5 Predicted protein | 742 | 1e-076 |
| B9T402 Mitochondrial ribosomal protein L24, putative | 730 | 4e-075 |
| C6SX56 Putative uncharacterized protein | 713 | 3e-073 |
| B9SFI4 Mitochondrial ribosomal protein L24, putative | 711 | 6e-073 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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