 |
Information for unigene UN00155
| FASTA Sequence |
| Unigene ID: UN00155 | Length: 756 |
SSR | | GGAACAGAAACCCTCAAGGCGACTAAAACCCCATCTCTCTCTGACTCTCTCTCTCTCTGTCTGTCTTGTCTTGTGTATAGTCCAAA
ATGGCTTCCGTCGTTCTTCGTAACCCTAGCTCGAAGCGCCTTCTCCCGTTCTCTTCTCAGATCTACTCACGTTGCGGTGGTTCCAT
TACTTCTTCTTCTCCCGCGATCTCTCATTCCATCGGAGGAGATGATCTCTCTCCTCCGTCAAGTTACGGAGCTTCTCTGTGGAGAT
CGATGGCCACATTCACTCGAAATAAACCTCATGTAAATGTAGGAACAATTGGGCATGTAGATCACGGGAAGACCACTTTAACTGCT
GCAATCACAAAGGTTCTTGCTGAAGAGGGTAAAGCTAAAGCTATTGCCTTTGATGAGATTGATAAAGCTCCTGAAGAGAAGAAGAG
AGGAATCACTATTGCCACGGCTCATGTGGAGTATGAGACTGCTAAGCGTCACTATGCTCATGTCGATTGCCCCGGTCACTCTGATT
ATGTTAAAAATATGATTACTGGAGCTGCACAAATGGATGGTGGGATTCTTGTGGTTTCTGGTCCAGATGGACCCATGCCTCAGACC
AAGGAACATATTCTACTTGCCCGTCAGGTTGGCGTTCCATCACTTGTGTGTTTTCTGAACAAAGTTGATGTGGTTGATGATCCAGA
GTTGTTGGAGCTTGTGGAGATGGAACTGCGGGAACTTCTGAGCTTCTACAAGTTTCCAGGGGATGATA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002872804 hypothetical protein ARALYDRAFT_490266 [Arabidopsis lyrata subsp. lyrata] | 1064 | 6e-114 |
| NP_192202 Elongation factor Tu [Arabidopsis thaliana] | 1059 | 2e-113 |
| CAA61511 mitochondrial elongation factor Tu [Arabidopsis thaliana] | 1018 | 1e-108 |
| XP_002892157 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1001 | 1e-106 |
| XP_002320388 predicted protein [Populus trichocarpa] | 927 | 5e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZT91 Elongation factor Tu, mitochondrial | 1059 | 1e-114 |
| Q07KJ2 Elongation factor Tu | 724 | 8e-076 |
| Q0BUQ2 Elongation factor Tu | 722 | 1e-075 |
| Q211E6 Elongation factor Tu | 718 | 4e-075 |
| Q134R0 Elongation factor Tu 2 | 715 | 9e-075 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WUV8 Elongation factor Tu | 1059 | 2e-113 |
| B9IA13 Elongation factor Tu | 927 | 3e-098 |
| B9SFP0 Elongation factor Tu | 925 | 6e-098 |
| A5BV56 Elongation factor Tu | 918 | 4e-097 |
| B9GTD8 Elongation factor Tu | 910 | 3e-096 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G02930.1 elongation factor Tu, putative / EF-Tu, putative | 1064 | 3e-116 |
| AT4G20360.1 ATRABE1B (ARABIDOPSIS RAB GTPASE HOMOLOG E1B); GTP binding / GTPase/ translation elongation factor | 659 | 2e-069 |
| AT1G07920.1 elongation factor 1-alpha / EF-1-alpha | 198 | 7e-016 |
| AT1G07930.1 elongation factor 1-alpha / EF-1-alpha | 198 | 7e-016 |
| AT1G07940.1 elongation factor 1-alpha / EF-1-alpha | 198 | 7e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
