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Information for unigene UN00170
| FASTA Sequence |
| Unigene ID: UN00170 | Length: 1251 |
SSR | | GGAGCTCTTATTACCAGAAAGGAAAGAAAGACCTTGTAATAAGGGTTTAGAGAGAGAGAGAGAGAGAGACTGTTTTATAAGGTGAA
AAGAGAGGAGAAGATGGAAAACACAGACGAGGTCGTGTCCATTGAGCTTCCAGCTCCTCCTTCATGGAAAAAACTGTTTTATCCGA
AGAGAGCAGGTACACCGAGGAAGACAGAGATTGTGTTCATGGCTCCAACGGGTGAAGAGATCAGCTCACGCAAGCAGCTTGAGAAG
TACCTCAAGGCTCATCCTGGGAATCCTGTCATCTCTGAGTTTGATTGGACAACCGGGGAGACTCCAAGACGGTCTTCAAGGATCAG
CCAGAAGGTGAAGGCTGCTACAAGCCCCACTCCTGAGAAAGAACCTCTCTTGAAGAAGAGACGCTCTTCTCTCACTAAGAAGGATA
ACAAAGAGGCTGCTGAGAAGAACCAAGCAGAGGCTGACAAGAACGGACAGACAGAGGTTGCTGTTAAGGAGAACAAAGAGAGTGAA
AAGACCGAAGCTGAGAAGCAAGCTGAAATTGCAGAGGCTGTGAAGGAGAACAAGGAGGGTGAAAAGACTGAGGCTGAAAACAAAGA
AGGAGAAGCTGTGATGGACAAGAAAGAGCCTATGGAAGTGGCTACCTCTGAGTTTGAGAAGAAGGCTGAGAGTGGAGGAGGAGATG
AAGAAACTCCCAAAGTTGAAGACCTGAAGGACACCGAAATGAAAGAACCACAGGAAGTAGTTACTGAGGGTGATGGAGAGAAGAAG
CTTGCAGAGAAAGAGACTGATATCAAGGACGGCAGCATGGGCGCTGAAGCAAACGGAAATGAAGCCAAAGAAGCGGATGTGCACAA
GAAAGATGGTGAGCCTAACCTTGATGCAGAGGCAGAAGCTAATAAGGGGAATGCAACACAAGAAGCTGCAGCAGCTGTAGCTGAGG
AGATAAGTAACGAGGTGAAGGCTGAAGACACAAACAGAGGCCTAGAGGCGCAGCTAGGCGCTGCAGCGTCCGTGAGCTGTTGAAAG
CCCTATCGTCTGCACAGAACGTGGAGAGTTTGTTGTGGTCTGATTCAGGTGTAGCATTAACTTTATGAGTGGTTGTTGTACGTGTA
GAAGTAATTATAATATGTTCTCTGTTATGTAGTTCATTTTTATTTCAGACTCTTGATTTTTCTTTTACTGTTGTTCTATTGTACTT
GTGGTGTGTTGTTAATTTTAGGCATTTATTTTGGTCTGTTTATTTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892861 hypothetical protein ARALYDRAFT_312525 [Arabidopsis lyrata subsp. lyrata] | 972 | 7e-103 |
| NP_563971 methyl-CPG-binding domain 10 [Arabidopsis thaliana] | 734 | 3e-075 |
| AAN60295 unknown [Arabidopsis thaliana] | 718 | 2e-073 |
| XP_002517633 Nucleosome-binding protein, putative [Ricinus communis] | 495 | 1e-047 |
| ACU21364 unknown [Glycine max] | 471 | 8e-045 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54J55 Myb-like protein X | 162 | 2e-010 |
| O94317 Uncharacterized serine-rich protein C215.13 | 161 | 3e-010 |
| Q28092 Cylicin-2 | 153 | 3e-009 |
| Q55FI4 Nucleolar protein 58 | 153 | 3e-009 |
| P36044 Protein MNN4 | 141 | 7e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9XI36 At1g15340 | 734 | 2e-075 |
| Q8H7D1 Putative uncharacterized protein | 718 | 1e-073 |
| Q0WLE9 Putative uncharacterized protein At1g15340 | 656 | 2e-066 |
| B9RV64 Nucleosome-binding protein, putative | 495 | 9e-048 |
| C6THR2 Putative uncharacterized protein | 471 | 6e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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