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Information for unigene UN00190
| FASTA Sequence |
| Unigene ID: UN00190 | Length: 1289 |
SSR | | GGATTCGAAGCAGTCAGTGGAATCGCTATCAATGGAGGCTACGACGGCGGCGGCGGCGGCTCCATTCTCGTCCTTTGCCACTTCAA
GACAAAACCTTTCTTCTTCCCCTTGTTCGTCGCTCCTTTCCCGGAAGAAACTCGGTAGTACTAATCTCAAATTCAAATCTCCGAGA
AGCCTCTCTGTTCGCGCATCTTCAACCTCCGATTCTGTTGTGACTTTGCTTGACTACGGAGCTGGGAATGTCCGTAGTATCCGTAA
CGCTCTTCGTCACCTCGGTTTCAGCATCAAAGACGTGAAAACACCAGGTGACATTCTGAATGCTGATCGCCTCATCTTTCCCGGCG
TTGGAGCTTTTGCACCCGCCATGGATGTACTTAACAAAACCGGGATGGGAGAAGCTTTGTGCACATATATTGAGAACGACCGTCCT
TTCCTAGGCATATGTCTTGGCTTACAACTACTTTTCGACTCTAGTGAGGAGAATGGACCAGTCAAAGGTCTTGGTGTTATACCCGG
AACGGTTGGACGCTTTGATTCTTCAGCTGGTATAAGAGTACCCCACATTGGCTGGAATGCTTTGCAAGTCGGGAACGATTCTGAAA
TTTTGGATGATGTTGGAAGCCGTCATGTGTATTTTGTCCATTCTTACAGGGCCATTCCGTAAAATGAAAACAAGGATTGGATTTCG
TCTACCTGCCATTATGGCGAATCCTTTATCTCTTCCATAAGAAGAGGAAATGTGCATGCAGTCCAGTTCCATCCAGAGAAGAGTGG
GGAGGTGGGGCTTTCTGTTTTAAGAAGGTTCTTGGATCCAAAATCACCCTCGAAACAGAAACCAATGGAAGGGAAGGCTTCAAAGC
TTGCAAAGAGGGTGATTGCTTGTCTTGACGTGAGGACTAATGATAAAGGAGATCTTGTAGTAACTAAAGGCGACCAATATGATGTG
AGAGAGCAATCTAACGAAAACGAGGTACACATCAGAGAATGTGTTCGTACCACTAACCGTTGGAGGTGGTATTAGAGATTTTACAG
ATGCTACCGGCAGGTACTATTCTAGCTTAGAAGTTGCTGCTGAGTATTTCAGATCCGGTGCGGATAAAATCTCCATAGGAAGTGAT
GCTGTTTATGCTGCGGAAGAGTTTATTAAATCAGGGGTGAAGACAGGAAAGAGTAGCTTAGAACAAATATCCAGAGTTTATGGAAA
CCAGGCAGTGGTTGTAAGTATTGATCCTCGTAGAGTTTATGTGACCATCCTGATGATGTGCCATACAAAGTCATCAAAGTACTAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAC43102 putative glutamine amidotransferase/cyclase [Arabidopsis thaliana] | 1400 | 2e-152 |
| NP_194420 cyclase [Arabidopsis thaliana] | 1400 | 2e-152 |
| BAA28783 glutamine amidotransferase/cyclase [Arabidopsis thaliana] | 1392 | 1e-151 |
| BAA32287 glutamine amidotransferase/cyclase [Arabidopsis thaliana] | 1392 | 1e-151 |
| XP_002869588 AT-HF [Arabidopsis lyrata subsp. lyrata] | 1381 | 3e-150 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SZ30 Imidazole glycerol phosphate synthase hisHF, chloroplastic | 1400 | 7e-154 |
| Q9P4P9 Imidazole glycerol phosphate synthase hisHF | 540 | 4e-054 |
| Q3A135 Imidazole glycerol phosphate synthase subunit hisH | 448 | 2e-043 |
| Q2RGW0 Imidazole glycerol phosphate synthase subunit hisH | 427 | 5e-041 |
| Q92E86 Imidazole glycerol phosphate synthase subunit hisH | 425 | 8e-041 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GX14 At4g26900 | 1400 | 1e-152 |
| B9SVA2 Imidazole glycerol phosphate synthase subunit hisf, putative | 1204 | 6e-130 |
| B9HNP1 Predicted protein | 1174 | 2e-126 |
| B9GFE9 Predicted protein | 1164 | 3e-125 |
| C5WQU1 Putative uncharacterized protein Sb01g040670 | 989 | 5e-105 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G26900.1 AT-HF (HIS HF); imidazoleglycerol-phosphate synthase | 1421 | 2e-157 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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