 |
Information for unigene UN00283
| FASTA Sequence |
| Unigene ID: UN00283 | Length: 1470 |
SSR | | GATACATACTCATTTATGATATTTAGAAATCGACTGACTAGAAATGAGATTTTTTTTCTGGCACATGACTAGAAATGGAGATTCGG
AGGTAATAAACTAATAACAAATGATTTAAGACCCAATAAAATATCCGAAAAAGAGCCAATCACTCTTGCTTTTTGGACAGAACAAA
ATTAATAAAATATTCCATTTTCACATGATAGCACCGACGACGACAGCGCAGGCCAGCGAAGCAACGACGGTGGAGAATTGCAGCGA
CGAAGAAGAAGATTTCTGAGAGAGTGGGATAGATCCAAATGCGTTTTGGTAAGAGGGAGCATCGGCATCGGCAGAAGAAGAAGGAG
ACAAGGCGTCTGCTTCGGCGGAGTAAGTGCCGACGGAGACAATGAGCTTCTGGTACTTTAGACAGTGGCCAGGCTGTCCGCTGGTG
AAGTAAAAGGTTCCGTTTTGGGTGAGGTTGAAGAGAGAGTTGCCGTCGTTCATGTACAAGATTGGATCTTTGGTGTTGCAGCTCTT
GAAGTTGGAAGGTGTCACTTGAATCATTGAATCTTCGCTTGGTGGGTACAAGAACAAGAGGGAGTCACCGATCTTGAAAGAGTGAG
ATTTGGGCCATTTGGAGTAGACTTTAGCATCAACCGGGATACCCCATGAGTCCAAGTTCCCGACTTTGTACTGCGTCGAAGATACT
TGCACTAACAGTATCATCACCAAAACCATTACGCTGCTCAAACTCATCATTCCCATCTCTCTCTCTCTCTCCCCTCCTGTCTTGAT
TCCCCCGGCCGTAAGCAGTGGTATCAACGCAGAGTTTAGCGAAGATGATCTCATAGTTTTAGCTGCTGGAAGAGAACCAAGTCCCA
GACAGTCACTGCTAACTCCGAGATCCGGAACACAGCATGGCCTACCATTCCCAGATGGCTTGGACCCATTTGCGCCTTCTGACAAG
TGAGGGGTGGCATATTTTTCACAAGACGACACAACAGTTCGCTTGGCTGGCCTTTTGTCCTGATGCTGGCAACAAGATTCTATGCT
CCTACTAGAGCATGGCATAGACACAGTGTTGCTTAATGTTTTAACAGGGCATAAACCATTCCCGTTAGGAGACAAGCATTCCCCGG
CTTTGCGTCCTTTGCATGCCCACCCAGAGAAAAGAGTAACGAGAGCAGCATCCGATTTAGGTGCTGAGGCCACAACCCAACCATTT
AATCATGAAAAATTGTGCGTAGCTGATAAATTTCTAAAGAGGTTAAGTTTCACTAAAAAAGGAAACAAAGATTGTACCTCCAGCTT
GTAAGTTCTTCAGAAAATTCTTAGCTTCATCTTCTGTTAAAGATGCCGCCAGCCATGGCAAAACACGTTCAATTAATCTCAGCATT
ATACACAGGCTTTGGTAGAGAAGTTCTTGTTGACGTTTAAAGGTGAAGTTCTTGCGTGCAAGGGGTAGCACCTGGAAACATTATGA
AGTTAGCT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002886333 hypothetical protein ARALYDRAFT_474878 [Arabidopsis lyrata subsp. lyrata] | 750 | 5e-077 |
| NP_176645 early nodulin-like protein 8 [Arabidopsis thaliana] | 738 | 1e-075 |
| XP_002518894 Stellacyanin, putative [Ricinus communis] | 470 | 1e-044 |
| ACU16613 unknown [Glycine max] | 469 | 2e-044 |
| ACU16793 unknown [Glycine max] | 465 | 5e-044 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SK27 Early nodulin-like protein 1 | 206 | 2e-015 |
| P80728 Mavicyanin | 196 | 3e-014 |
| Q9T076 Early nodulin-like protein 2 | 193 | 8e-014 |
| Q02917 Early nodulin-55-2 | 175 | 9e-012 |
| Q41001 Blue copper protein | 173 | 2e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6NLD7 At1g64640 | 738 | 8e-076 |
| B9RYS5 Stellacyanin, putative | 470 | 9e-045 |
| C6T4K3 Putative uncharacterized protein | 469 | 1e-044 |
| C6T511 Putative uncharacterized protein | 465 | 4e-044 |
| B9GK88 Predicted protein (Fragment) | 447 | 4e-042 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G64640.1 plastocyanin-like domain-containing protein | 759 | 2e-080 |
| AT3G18290.1 EMB2454 (embryo defective 2454); protein binding / zinc ion binding | 355 | 1e-033 |
| AT3G18590.1 plastocyanin-like domain-containing protein | 260 | 1e-022 |
| AT3G20570.1 plastocyanin-like domain-containing protein | 246 | 5e-021 |
| AT1G48940.1 plastocyanin-like domain-containing protein | 225 | 1e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
