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Information for unigene UN00308

FASTA Sequence
Unigene ID: UN00308Length: 805 SSR 
AAAAAAAAAAAATCTTATTTCAGTTTTCAATCCATGCAGCATGATACATCATATATTCAATACACAAGTTTCTTATTACACAACCC
ACACAATTAAATAAAAAAATAAAGCAGCACAATTAAACAATGAATTTTAAACATAAGAGAACAAATCCAAGACCAAAGCCTAATCC
AGCCTTCATCTCACCGGAGCCAGACTTCTCGGACGGAACCGCCGCTTTCTTAGAGGAGTCGTCTGATGAGTCATCGGAGACAGCAG
GAGATTTGGATTTTGGAGCAGGCGCCACCGGTGAGATCTTCTTGCGGTCTCCAAACATCTCTTCAGGCAACAATACCATGTCCACC
ACGTAAACCGCAAGTGGACGTTCTTTTCTCAATGCATTACTGACAGGGTTGCTTACGGAGAGAAGATCATCCATTGTGTAGAACTT
GGGACTAACATGGTAAAGAATGAGCTTGACTTGGTCGTCCGGGCTTAACTTGTTTAGGGCTCCCGGTTTAAGGTTTTGGAAAGCGT
TGTCCGTTGGTGCGAATACGGTCATGCCTTCTGATGAACTGTTGACTTGGATGTTGATTTGGTTTCCGATTTGTGTTGTGTTTAGA
AGACGGATAAAAGTAACAAACTGACCGCCTTTTTCTAGGATAGATGTGATGTTGATGGGACCGGCAGGGCCAGGAGCAGGAGCGGC
GGGATGAGCAGTTACCTCTGTAGAGAGGAAGATGGCGGCGAGGAGGAGGAGGAGAGGAGCTAGCGTTAGATGAATGGTTGCCATTG
TGTTTTGAAGTTTGAGTTTATGCGTGGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199226 fasciclin-like arabinogalactan protein 13 [Arabidopsis thaliana]5503e-054
XP_002865383 hypothetical protein ARALYDRAFT_494579 [Arabidopsis lyrata subsp. lyrata]5503e-054
NP_563692 fasciclin-like arabinogalactan protein 9 [Arabidopsis thaliana]5387e-053
AAN60339 unknown [Arabidopsis thaliana]5342e-052
XP_002892185 hypothetical protein ARALYDRAFT_470362 [Arabidopsis lyrata subsp. lyrata]5342e-052

Swiss-Prot top hits (Blast detail)Scoree value
Q9FFH6 Fasciclin-like arabinogalactan protein 135501e-055
Q9ZWA8 Fasciclin-like arabinogalactan protein 95383e-054
Q9SIL7 Fasciclin-like arabinogalactan protein 63466e-032
Q8LEJ6 Fasciclin-like arabinogalactan protein 113198e-029
Q8LEE9 Fasciclin-like arabinogalactan protein 122741e-023

TrEMBL top hits (Blast detail)Scoree value
B3LF88 At1g038705385e-053
A0T2P3 Putative uncharacterized protein5053e-049
B9IQS4 Fasciclin-like arabinogalactan protein 9.23961e-036
B9RVS1 Putative uncharacterized protein3711e-033
C6T1A1 Putative uncharacterized protein (Fragment)3692e-033

Arabidopsis top hits (Blast detail)Scoree value
AT5G44130.1 FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR)5501e-056
AT1G03870.1 FLA9 (FASCICLIN-LIKE ARABINOOGALACTAN 9)5383e-055
AT2G20520.1 FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6)3465e-033
AT5G03170.1 FLA113197e-030
AT5G60490.1 FLA122741e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  100%

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