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Information for unigene UN00337

FASTA Sequence
Unigene ID: UN00337Length: 870 SSR 
AGGGGAAGAAACTACATTCATAAAATTGGTAAAAGAGATGGAATTACAAATATATTTTTCTATATTTTTACTTATACAAGTAAAGA
CAAGTGAAGAAAAAGAAAAGAAAAATGAAGAAACAACATTCAATGTAGCGTAAAGATCTCTCATGCATAAGTCATCTTCTCTGCAA
AGAGATGAGGATTTTTCTTGTTGTTACAAGTAACCTCTGTCATCTTCTTCAACCTGTATTATTTAGAAGCAACGTACTGAAACAAA
GAGCAAAAACTAACGCAATTGAAAACCCGTAAGAGAAACTTGTTTTCCCAACGGATCCAGACAACACAACAGATTGCGGCGGAGGG
TTGTAGTAGTAAAACGGAAAGTAAGGAACGATCGGGTTCGGCGGCGGCGTAAAAGGGTAGTTTCCTCCACTTTTAGGCGGTGGATA
AACGTAGCCACCATCGCCGGAGGAAGACGGTGGTGGACGGTAAGAGCTAGACTGAGAAGGAGGTGGGTAGTAGTAGTAAGGACCAC
CACCACCACCACTTCCAGAGCTAGGAGGCGGAGGACATGCGGTGGTCGTGGTTGGAGGTGGCGGAGATGGAGTGGGTGGTGGAGGA
GAGGGATTTGGCTGACAAGGATTGTCACAAGACGTGCACATTGTACAGTCAACGATCTGAGAGTTTGCGGACGTAAGCGTAGTGTG
TGTCGTCAAGAAGATAAAGTGAGAGAGAAAAAGGAAAAGATGAAATGTTCGGAATGTTTCCATTGTCGAAGTGAATCTGGAGTTTG
TGTCTGATTAGAGAATCTGTAAGTGAACGAAGCAAATTTGAGGACGGAGAAAGGAGGGAAGAGGACAAAGAAGAGAAGGGGCACAA
GTGTTAGAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870180 predicted protein [Arabidopsis lyrata subsp. lyrata]7117e-073
NP_193349 proline-rich family protein [Arabidopsis thaliana]6661e-067
NP_568708 hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]4349e-041
XP_002865724 hypothetical protein ARALYDRAFT_494989 [Arabidopsis lyrata subsp. lyrata]4322e-040
XP_002519176 nutrient reservoir, putative [Ricinus communis]4071e-037

Swiss-Prot top hits (Blast detail)Scoree value
O53426 Proline-rich antigen homolog1872e-013
Q9LUI1 Leucine-rich repeat extensin-like protein 61746e-012
O65375 Leucine-rich repeat extensin-like protein 11711e-011
Q6BSP4 Branchpoint-bridging protein1423e-008
Q84ZL0 Formin-like protein 51389e-008

TrEMBL top hits (Blast detail)Scoree value
O23462 At4g161406668e-068
Q9FJ12 At5g492804346e-041
B9RZK7 Nutrient reservoir, putative4079e-038
B9HX94 Predicted protein3746e-034
B9RNJ0 Nutrient reservoir, putative3423e-030

Arabidopsis top hits (Blast detail)Scoree value
AT4G16140.1 proline-rich family protein6729e-071
AT5G49280.1 hydroxyproline-rich glycoprotein family protein4344e-043
AT3G06750.1 hydroxyproline-rich glycoprotein family protein3206e-030
AT1G70985.1 hydroxyproline-rich glycoprotein family protein1818e-014
AT3G22800.1 leucine-rich repeat family protein / extensin family protein1818e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  100%

Unigene MembersMember information