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Information for unigene UN00337
| FASTA Sequence |
| Unigene ID: UN00337 | Length: 870 |
SSR | | AGGGGAAGAAACTACATTCATAAAATTGGTAAAAGAGATGGAATTACAAATATATTTTTCTATATTTTTACTTATACAAGTAAAGA
CAAGTGAAGAAAAAGAAAAGAAAAATGAAGAAACAACATTCAATGTAGCGTAAAGATCTCTCATGCATAAGTCATCTTCTCTGCAA
AGAGATGAGGATTTTTCTTGTTGTTACAAGTAACCTCTGTCATCTTCTTCAACCTGTATTATTTAGAAGCAACGTACTGAAACAAA
GAGCAAAAACTAACGCAATTGAAAACCCGTAAGAGAAACTTGTTTTCCCAACGGATCCAGACAACACAACAGATTGCGGCGGAGGG
TTGTAGTAGTAAAACGGAAAGTAAGGAACGATCGGGTTCGGCGGCGGCGTAAAAGGGTAGTTTCCTCCACTTTTAGGCGGTGGATA
AACGTAGCCACCATCGCCGGAGGAAGACGGTGGTGGACGGTAAGAGCTAGACTGAGAAGGAGGTGGGTAGTAGTAGTAAGGACCAC
CACCACCACCACTTCCAGAGCTAGGAGGCGGAGGACATGCGGTGGTCGTGGTTGGAGGTGGCGGAGATGGAGTGGGTGGTGGAGGA
GAGGGATTTGGCTGACAAGGATTGTCACAAGACGTGCACATTGTACAGTCAACGATCTGAGAGTTTGCGGACGTAAGCGTAGTGTG
TGTCGTCAAGAAGATAAAGTGAGAGAGAAAAAGGAAAAGATGAAATGTTCGGAATGTTTCCATTGTCGAAGTGAATCTGGAGTTTG
TGTCTGATTAGAGAATCTGTAAGTGAACGAAGCAAATTTGAGGACGGAGAAAGGAGGGAAGAGGACAAAGAAGAGAAGGGGCACAA
GTGTTAGAGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002870180 predicted protein [Arabidopsis lyrata subsp. lyrata] | 711 | 7e-073 |
| NP_193349 proline-rich family protein [Arabidopsis thaliana] | 666 | 1e-067 |
| NP_568708 hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] | 434 | 9e-041 |
| XP_002865724 hypothetical protein ARALYDRAFT_494989 [Arabidopsis lyrata subsp. lyrata] | 432 | 2e-040 |
| XP_002519176 nutrient reservoir, putative [Ricinus communis] | 407 | 1e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O53426 Proline-rich antigen homolog | 187 | 2e-013 |
| Q9LUI1 Leucine-rich repeat extensin-like protein 6 | 174 | 6e-012 |
| O65375 Leucine-rich repeat extensin-like protein 1 | 171 | 1e-011 |
| Q6BSP4 Branchpoint-bridging protein | 142 | 3e-008 |
| Q84ZL0 Formin-like protein 5 | 138 | 9e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O23462 At4g16140 | 666 | 8e-068 |
| Q9FJ12 At5g49280 | 434 | 6e-041 |
| B9RZK7 Nutrient reservoir, putative | 407 | 9e-038 |
| B9HX94 Predicted protein | 374 | 6e-034 |
| B9RNJ0 Nutrient reservoir, putative | 342 | 3e-030 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G16140.1 proline-rich family protein | 672 | 9e-071 |
| AT5G49280.1 hydroxyproline-rich glycoprotein family protein | 434 | 4e-043 |
| AT3G06750.1 hydroxyproline-rich glycoprotein family protein | 320 | 6e-030 |
| AT1G70985.1 hydroxyproline-rich glycoprotein family protein | 181 | 8e-014 |
| AT3G22800.1 leucine-rich repeat family protein / extensin family protein | 181 | 8e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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