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Information for unigene UN00368

FASTA Sequence
Unigene ID: UN00368Length: 921 SSR 
GGGACATCTTCAACCAAACTCACAAACAAGAAAAAGAACCATAACAAGAACAAGAGAAGGATTCTGCGTTGGAAACCACACAAGAA
CATAGAGAGATAAGACTTCTTGATCTTGAAAAAGAAGAATGGCGTATGAGAAAGTCAACGAGCTTAACCTTAAGGACACAGAGCTT
CGTCTTGGATTACCTGGAACAGAACAAGTTAAAGAAGAACAAGACGTTTCTTGCGTTAGAAGCAACAAGCGTCAACTACAAAGCGA
TAACGAGGAAGAATCGACTACACCTCCTACAAAAACTCAAATCGTCGGTTGGCCTCCGGTGAGATCTTACCGTAAGGACAACAACA
ACAACAACAACAACAACAACAACAACAGTGTTAGCTATGTGAAAGTGAGTATGGACGGAGCACCATACCTCCGTAAAATAGATCTC
AAAACGTACAAAAACTATCCAGAGCTTCTCAAGGCGTTGGAGAACATGTTCAAGTTCACGATCGGTGAATACTGCGAAAGAGAAGG
ATACAAAGGATCTGAAGTTGTACCAACGTACGAGGATAAAGATGGAGACTGGATGTTGGTTGGTGATGTTCCGTGGGATATGTTTT
CTTCCTCTTGTAAGAGACTCAGAATCATGAAAGGATCTGATGCTCTTGCTTTAGACTCTGCCCTATGATGATGATGATGGTGAAGA
AGACTTCGATGAGAGCTTTTGATGATTGAAACCCTTTATTTGATTTGGATCTGATCGGTGTTTGAGTAGTTGACTACACCATAAAC
AAATCCTTCAGGGTTTTGTTAGATGAGATAGTTCCATATCCAAGTGATTTTCTTTTTTTATTTTCTTTTTTAGATTTGGAGTTCCA
TGTAAAGAAGATACATGAATTTTTTTAATGTTTAATACGGACATATACACAATATAGATGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885542 indoleacetic acid-induced protein 2 [Arabidopsis lyrata subsp. lyrata]7386e-076
NP_188943 auxin-responsive protein IAA2 [Arabidopsis thaliana]7215e-074
AAB97164 auxin-responsive protein IAA2 [Arabidopsis thaliana]7181e-073
ADL70491 indole-3-acetic acid inducible 2 [Arabidopsis thaliana]7181e-073
ADC29363 indole-3-acetic acid inducible 2 [Arabidopsis thaliana]7153e-073

Swiss-Prot top hits (Blast detail)Scoree value
P49678 Auxin-responsive protein IAA27212e-075
P49677 Auxin-responsive protein IAA16585e-068
P33077 Auxin-responsive protein IAA45967e-061
Q38822 Auxin-responsive protein IAA35107e-051
O24542 Auxin-induced protein 22D5026e-050

TrEMBL top hits (Blast detail)Scoree value
D3K0A7 Indole-3-acetic acid inducible 27214e-074
D3K0B1 Indole-3-acetic acid inducible 27152e-073
D3K0A4 Indole-3-acetic acid inducible 16613e-067
Q67YC2 Auxin-responsive protein IAA16587e-067
D3K0A2 Indole-3-acetic acid inducible 16571e-066

Arabidopsis top hits (Blast detail)Scoree value
AT3G23030.1 IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE 2); transcription factor7222e-076
AT4G14560.1 IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE); protein binding / transcription factor6755e-071
AT5G43700.1 ATAUX2-11 (AUXIN INDUCIBLE 2-11); DNA binding / transcription factor5967e-062
AT1G04240.1 SHY2 (SHORT HYPOCOTYL 2); transcription factor5106e-052
AT3G15540.1 IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19); transcription factor3458e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
111  50%

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