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Information for unigene UN00373

FASTA Sequence
Unigene ID: UN00373Length: 1760 SSR 
GCACTTAATTCCTAGTCTCTCTATAATGTCTGTGCTTATGAGCTTCCTATAAGTGTTACACTTGCACCTAACTGTTACCTTTTCCG
AAAATTTAAATCATTCTTCCTACTAAACTTAAACTTAATAGATTGGAGTCAGTTGATACCCAAAAAATAATATGAAATCAGTTTGC
AAACTAATAAAACAGATGAATGTTGCAGCCAGAGGGGGTTCTCTAATTCAGCCTATTACTTGGCTTTGCTGTTATTGACATCCTCG
TCAACATCCATGGCGTTACTGTTAATGTCAATACCAACATCCACACTCTTCTTGTTGTTCTTGTCTGAGTTACTATCGCAATTCTC
GAGGATGATATTGCAGTTATTGATGGGTGGCCGAGTCTACAAGTCCAATGTTCCATAGTTTTATCATAAATAATCTCCAGCACCAG
AAGAGTGGTGAAGAATGGAGCAACTCTTCCTTGTGAAACTTTGAAAATGCTTCACATGCCCATGGTATATGACCATCCGCCACAAC
CCTTTGTTTTCTTACAAAAGAGTTCCAAAGATGCATGAATCTCTTTTCGTTCTTATTCACATCCACAAAATCATCAAGCATCTGGC
GATCTTCCAGATCTGCAACGTCATCATCCACTTCATCTTCGCTATCTCGATCAGACATTACTTGCTCAAGTGACATTGGCTGAACT
CTGTGAGAATGATAGAACTGGCGTTTCTGGAGAAGTAGGTTGCTTCTAGCCTCTGATCGCTCGGCAGATAACTTTCTTGTCTTAGC
AGCATGGGCCACAGCTTCGCTTGCTAACACAGCTTTGGCATTCGAGTTCATCGAACACTGAGCTATGGCTGGTGAATTGTTCATCC
CGAACTGTCCAGCAACATCTGTTGCCACGGGGTATCCTAAACTATGGTTTCCATTACTCAGCAGAGGGGTTCCATTATCTGTGCCA
TTGGGTAAACTGGGCGAATCCATTGGTAAAAAGGTTACATTTAGTAGGCTGGGGTTAACTCTATGACCTCTTTGTCTACGCTTACG
TGGTTTCGAGCAAAAAGAGATGAGCTCAAATTTTTCTTGATGAATTCCTTCTTCCTCTGATTCGAATGCATCAAGCCTTACAGAGA
CATTAACTGTCTGGTATTCTTCTGAAAGAGGGAACTCAAACTCAAGTAAGTCATGAAAAGAATTCAAATGAAGTTGTAGACCCTTG
AAGGTACCGCATGTCATGTAGCAGAATGGACAAGAACAATTCTCCGTAACTTCAGTTTTCTGCAGTGTGTTATTACAATCCTTATA
ATTAAAAACTACAATCCCAGCAGATCCGGACTTTCTTTTGCCCTTTGCTCGAATTTTGTAGCTCAAGCATCTAGGAAGAAACGATG
GGTTGAAAAGAGAGCGAATGCGAAGAATGTTGTAGAGACGAACAGGTTTACAATAGATCAAGAGATTCTCGTCAGGTGGTGAAACC
ACTTCCTCCTCTTGTGACGATTTCGCGCAACAGTTCTGCCGACACATTCTCTCTCTGTCTAATCAAATAGCTGCTACAATTAGATC
TCCGAATCACCTTTTTGTGTAGGAGTTGTCTGCAATTAGGATTATTCAATCAATGGATAGCAGATCCGAGGGAGTTTGAACCTACG
AAGAACAAAGTCAAATCAAAGATCTCAAAGAGCTGAATTAGCAGCTAACATGAGAAGACAGCTCTCAGATGTGCCTGCCGGAGAAG
AAGAGAGAGAGAGAGGGACGGAAACCGAGGATGAGAGAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAL32135 vernalization 2 protein [Arabidopsis thaliana]14998e-164
NP_567517 polycomb group protein VERNALIZATION 2 [Arabidopsis thaliana]14801e-161
NP_974563 polycomb group protein VERNALIZATION 2 [Arabidopsis thaliana]11289e-121
ACV87734 embryonic flower 2 [Camellia sinensis]8188e-085
NP_851168 polycomb group protein EMBRYONIC FLOWER 2 [Arabidopsis thaliana]7722e-079

Swiss-Prot top hits (Blast detail)Scoree value
Q8W5B1 Polycomb group protein VERNALIZATION 214805e-163
Q8L6Y4 Polycomb group protein EMBRYONIC FLOWER 27727e-081
Q9ZNT9 Polycomb group protein FERTILIZATION-INDEPENDENT SEED 24251e-040
Q6DC03 Polycomb protein suz12-A1581e-009
B0R1D5 Polycomb protein suz12-B1257e-006

TrEMBL top hits (Blast detail)Scoree value
Q3E6U1 Putative uncharacterized protein At4g16845.211286e-121
C9E9W1 Embryonic flower 28185e-085
Q58A50 Embryonic flower 28015e-083
B9T283 Polycomb protein embryonic flower, putative6026e-060
B9GYN4 Putative uncharacterized protein VEF9045954e-059

Arabidopsis top hits (Blast detail)Scoree value
AT4G16845.1 VRN2 (REDUCED VERNALIZATION RESPONSE 2); transcription factor14805e-164
AT4G16845.2 VRN2 (REDUCED VERNALIZATION RESPONSE 2); transcription factor11283e-123
AT5G51230.1 EMF2 (EMBRYONIC FLOWER 2); DNA binding / transcription factor7726e-082
AT5G51230.2 EMF2 (EMBRYONIC FLOWER 2); DNA binding / transcription factor7691e-081
AT5G51230.3 EMF2 (EMBRYONIC FLOWER 2); DNA binding / transcription factor7691e-081

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  17%
 
101  17%
 
91  17%
 
212  33%
 
181  17%

Unigene MembersMember information