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Information for unigene UN00398
| FASTA Sequence |
| Unigene ID: UN00398 | Length: 1092 |
SSR | | GGACGGCAGCGATGAAGGAAGGAGGATACGCAAACTGGGCGGAGCTTCCGCCGGAGCTGACGTCATCGATTCTTCACCGGCTCGGC
GCGATCGAGATAGTGGAAAACGTACAGAAAGTGTGCAGATCGTGGCGTCGCGTCTGTAAAGACCCTTCGATGTGGCGCGAAATCGA
CATGCGTAACCTCGGAGACTTTGGGGACATGTACTACGAGAAATTGTGCCGTCACGCAGTTGATCTTAGCCGTGGCGAGTTGGTTG
AGATCAACCTCTGCCACTTCGCCACTGATTCTCTCCTCAATTACATCGCCGATAGTTCAAGTAACCTGAGAACCCTTAAAGTTGCA
ATGTGCTATGAAATAACAAGCGAGGGGCTTATGGAAGCAGTTTCGAAACTTCCGTTGCTTGAAGTCCTCGAGGTTTCTTACTGCTC
GGTATCAGGAGAGTCTCTTAAAGTTGTAGGCCAGTCTTGTCCAAATCTTAAGACCCTGAAGAAAAACTGCGTGGGTTACAAGCGTC
CTCGAGACGAGTGTGATGATGTTGCTCTTGCTGTCGCTAAAACAATGCCCGGACTTTGCCACCTCCAGCTTTTCGGGGACAGGTTA
ACGGACGCTGGTCTAAACGCCATTCTTGACGGTTGTCTTAACCTGGAACATCTTGATCTGCGCCAGTGTTTCAACGTTAACCTTGT
TGGGGATCTGGAGAAGCGGTGTCTCGAGAGGATTAAAGTTGTGAGACGCCCTAATGACTCGGTTCATGATTACCCATTCGATGCAA
CGGTTAATGACGTGTGTTCATCCGACGATGAAGAACTTTATGGTTTATCTGATGTTGATATAATGTCAGAAGATGAGTTTTACTAT
GATGACCTCTCAGATGCTAGTGACAATTCTGACTTTGACCCGTACTATTATTATTAGCATGATCTGTGTTTCTAAACCGTTTTCAA
ACTCGTTAATGACCCTCCTTTAAGCATATGCTTGTACTTTCGTTGGACTTCATGTGTCCTTGTGTAATGTGTGTGTGTGTGTGAGC
TTTAGCAGTATTTTCTATATGCCTTGTCTTTCTGGAAGGTCGAAATGATGTGTTAGTTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874842 F-box family protein [Arabidopsis lyrata subsp. lyrata] | 1002 | 2e-106 |
| NP_567294 F-box protein SKIP19 [Arabidopsis thaliana] | 938 | 5e-099 |
| AAM65310 F-box protein family, AtFBL20 [Arabidopsis thaliana] | 934 | 1e-098 |
| XP_002874843 hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata] | 868 | 6e-091 |
| XP_002274093 PREDICTED: hypothetical protein [Vitis vinifera] | 841 | 8e-088 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M0U9 F-box protein SKIP19 | 938 | 2e-100 |
| Q9S9V9 Putative F-box/LRR-repeat protein 23 | 766 | 2e-080 |
| Q9M0U6 Putative F-box/LRR-repeat protein 22 | 727 | 6e-076 |
| Q9S9V8 Putative F-box/LRR-repeat protein 9 | 701 | 6e-073 |
| Q9M0U7 Putative F-box protein At4g05480 | 437 | 3e-042 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5ALT6 Putative uncharacterized protein | 843 | 3e-088 |
| B9SKT5 Ubiquitin-protein ligase, putative | 744 | 1e-076 |
| Q9SY41 Putative nodulin | 592 | 4e-059 |
| Q9FHB4 Nodulin-like protein | 530 | 7e-052 |
| C5YZK2 Putative uncharacterized protein Sb09g002930 | 471 | 5e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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