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Information for unigene UN00406

FASTA Sequence
Unigene ID: UN00406Length: 983 SSR 
GGGAGAGAGCTGAGAGAGAGAGAGAGAGAGGCAAAATGGGTGTTTTGCTAAGAGAAGCGTTGAGGTCTATTTGCGTTAATAATCAA
TGGTCTTATGCTGTTTTCTGGAAAATCGGCTGCCAAAACTCAAGTTTGTTGGTTTGGGAGGAATGCTACAACGAAACCTCCCTTTC
TGGACATGACATTGATACCCAAGGGACTGTTCAGTTACTTACAAACAGAATGATGTTGAACAATCGAATCATTTTGGTAGGAGAAG
GGTTAGTTGGGAGAGCTGCATTTACAGGACATCATCAATGGATTCTAGCAGATAGTTTCAACCGCGGTGGTGTTCATCATCCACCT
GAGGTTATTAATGAGATGCTTCTCCAATTCTCTGCTGGTATTCAGACCGTCGCAGTTTTTCCAGTTGTTCCTCATGGTGTTGTTCA
ACTCGGTTCTTCCTTGCCTATTATGGAGAACTTGGGTTTTGTGAATGACGTGAAGGGTCTTATCCTGCAACTTGGATGTGTTCCGG
GTGCTCTCTTATCCGAGAGCTACACAACATCTTATGAGCCTCCTCCTGCTGCTGATTTTATTGGAGTCCCCGTGTCCGGTTTAATG
CCCTCTCAAGGACACAAGATCCTCCAGTCTTCTGCTTTTGTATCCGAAGCTAGCAAACCGCATTTCAACTCCACTGCTTCATCATC
AGATCATCATACATTTGAAGAAGCTTCCTGTAATCATCTTGTGGATGAGCAGCAAGGAGGAGGATGGCAAAACACAACAAGTTTTC
TAGCAGGACCAGAGGCTTGGCTGAATCAAAACTTGTCTTGTATGTCTAATATGGAGCAGCAGCAGCACCAACAAACCCCATGTGAA
GACTCCGGCTCTAAACGAAGCGGTGATGACTTGTTTGATATGTTGGGTCTGGATGGTGATAGGACAGAGCTGTGAAACAGTTGGGG
GATGATGAGACAGACTGCTCACAGGAGTATCAGACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33802 unnamed protein product [Thellungiella halophila]11822e-127
NP_565640 transcription factor-related protein [Arabidopsis thaliana]11751e-126
BAH19848 AT2G27230 [Arabidopsis thaliana]11671e-125
XP_002879076 hypothetical protein ARALYDRAFT_481620 [Arabidopsis lyrata subsp. lyrata]11535e-124
XP_002298267 predicted protein [Populus trichocarpa]5792e-057

Swiss-Prot top hits (Blast detail)Scoree value
P0C7P8 Uncharacterized basic helix-loop-helix protein At1g061502203e-017

TrEMBL top hits (Blast detail)Scoree value
Q9XIN0 BHLH transcription factor11759e-127
B9DGI1 AT2G27230 protein11678e-126
B9HQ64 Predicted protein6004e-060
B9GHM8 Predicted protein5791e-057
A5B9A8 Putative uncharacterized protein4714e-045

Arabidopsis top hits (Blast detail)Scoree value
AT2G27230.1 LHW (LONESOME HIGHWAY); protein homodimerization/ transcription activator/ transcription factor11755e-129
AT2G27230.2 LHW (LONESOME HIGHWAY); protein homodimerization/ transcription activator/ transcription factor11755e-129
AT2G31280.1 basic helix-loop-helix (bHLH) protein-related2283e-019
AT2G31280.3 basic helix-loop-helix (bHLH) protein-related2283e-019
AT1G06150.1 transcription factor2203e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
81  50%

Unigene MembersMember information