RadishBase

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Information for unigene UN00460

FASTA Sequence

Unigene ID:UN00460

Length: 822

TTTTTTTCTTTCCCTCAATCCAAAGCTTCCTCTTCGTTTTATTATAACCAATCTTCATATCTTTCCTGAGTTAGCAATGGCCGTTG
GTGAGGTAATGAGGATGGATATACCAGCCGGTGGAGATTTAACAGTTACTTCGCCGGAGTTACATGTTCTCGCCGTTGATGATAGT
ATTGTGGATCGTAAGGTCATTGAGAGATTGCTAAGGATCTCTGCTTGTAAAGTGACCACTGTAGAGAGTGGGACTATGGCTTTGCA
GTACCTTGGCTTAGATGGAGACAAAGGAGCTTCTGGTCTTAAGGATTTGAAGGTGAATTTGATAGTGACGGATTACTCAATGCCAG
GACTAACAGGATATGATCTCCTTAAGAAGATTAAGGAATCTTCTGTTTTCAGAGAAATACCAGTTGTGATTATGTCATCTGAGAAC
ATCTTACCTCGTATAGAACAATGTCTGAGAGAAGGAGCAGAGGATTTTCTGTTAAAACCGGTGAAACTAGCCGATGTTAAGCGGAT
AAAAGAACTTATAATGAGAAATGAAGCAGATGATTGCAAAACCTTAAGCCATTCTAACAAAAGAAAACTTGCAGAAGACATTGATG
ATACAACATCACCATCACCATCATCATCATCATCATCAAGTCCTGATGATTCTTCTGTCGAGGACTTTCCATCTTCAAAACGGATG
AAATCAGAGCTTTCTTCTCTCCTTTGAAATATATATAGAGCCAAGACTTTAGCTAATGTCTGTTAATATTCATCATCTATGTTTTC
GTTCATTAAGTTTTGTTTTCGGGTCAATACAAGTTTTGTTTTCGGGCC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
XP_002893028 hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp. lyrata]	881	1e-092
NP_173339 two-component response regulator ARR7 [Arabidopsis thaliana]	801	2e-083
XP_002888998 hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp. lyrata]	706	2e-072
NP_177627 two-component response regulator ARR15 [Arabidopsis thaliana]	699	2e-071
XP_002511471 two-component sensor protein histidine protein kinase, putative [Ricinus communis]	608	6e-061

Swiss-Prot top hits (Blast detail)	Score	E value
Q9ZWS7 Two-component response regulator ARR7	801	1e-084
Q7G8V2 Two-component response regulator ARR15	699	7e-073
Q9SB04 Two-component response regulator ARR5	540	2e-054
Q9ZWS9 Two-component response regulator ARR3	519	5e-052
O82798 Two-component response regulator ARR4	517	9e-052

TrEMBL top hits (Blast detail)	Score	E value
Q2HIJ6 At1g19050	801	2e-083
B9R8Z6 Two-component sensor protein histidine protein kinase, putative	608	4e-061
B9IEK8 Type-a response regulator	559	2e-055
C6SY70 Putative uncharacterized protein	554	7e-055
C6T4K4 Putative uncharacterized protein	550	2e-054

Arabidopsis top hits (Blast detail)	Score	E value
AT1G19050.1 ARR7 (RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator	801	1e-085
AT1G74890.1 ARR15 (RESPONSE REGULATOR 15); transcription regulator/ two-component response regulator	699	6e-074
AT3G48100.1 ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator	540	2e-055
AT1G59940.1 ARR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator	519	5e-053
AT1G10470.1 ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator	517	8e-053

EST library breakdown for ESTs in the assembly


8	2			100%

Unigene Members