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Information for unigene UN00460

FASTA Sequence
Unigene ID: UN00460Length: 822 SSR 
TTTTTTTCTTTCCCTCAATCCAAAGCTTCCTCTTCGTTTTATTATAACCAATCTTCATATCTTTCCTGAGTTAGCAATGGCCGTTG
GTGAGGTAATGAGGATGGATATACCAGCCGGTGGAGATTTAACAGTTACTTCGCCGGAGTTACATGTTCTCGCCGTTGATGATAGT
ATTGTGGATCGTAAGGTCATTGAGAGATTGCTAAGGATCTCTGCTTGTAAAGTGACCACTGTAGAGAGTGGGACTATGGCTTTGCA
GTACCTTGGCTTAGATGGAGACAAAGGAGCTTCTGGTCTTAAGGATTTGAAGGTGAATTTGATAGTGACGGATTACTCAATGCCAG
GACTAACAGGATATGATCTCCTTAAGAAGATTAAGGAATCTTCTGTTTTCAGAGAAATACCAGTTGTGATTATGTCATCTGAGAAC
ATCTTACCTCGTATAGAACAATGTCTGAGAGAAGGAGCAGAGGATTTTCTGTTAAAACCGGTGAAACTAGCCGATGTTAAGCGGAT
AAAAGAACTTATAATGAGAAATGAAGCAGATGATTGCAAAACCTTAAGCCATTCTAACAAAAGAAAACTTGCAGAAGACATTGATG
ATACAACATCACCATCACCATCATCATCATCATCATCAAGTCCTGATGATTCTTCTGTCGAGGACTTTCCATCTTCAAAACGGATG
AAATCAGAGCTTTCTTCTCTCCTTTGAAATATATATAGAGCCAAGACTTTAGCTAATGTCTGTTAATATTCATCATCTATGTTTTC
GTTCATTAAGTTTTGTTTTCGGGTCAATACAAGTTTTGTTTTCGGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893028 hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp. lyrata]8811e-092
NP_173339 two-component response regulator ARR7 [Arabidopsis thaliana]8012e-083
XP_002888998 hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp. lyrata]7062e-072
NP_177627 two-component response regulator ARR15 [Arabidopsis thaliana]6992e-071
XP_002511471 two-component sensor protein histidine protein kinase, putative [Ricinus communis]6086e-061

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZWS7 Two-component response regulator ARR78011e-084
Q7G8V2 Two-component response regulator ARR156997e-073
Q9SB04 Two-component response regulator ARR55402e-054
Q9ZWS9 Two-component response regulator ARR35195e-052
O82798 Two-component response regulator ARR45179e-052

TrEMBL top hits (Blast detail)Scoree value
Q2HIJ6 At1g190508012e-083
B9R8Z6 Two-component sensor protein histidine protein kinase, putative6084e-061
B9IEK8 Type-a response regulator5592e-055
C6SY70 Putative uncharacterized protein5547e-055
C6T4K4 Putative uncharacterized protein5502e-054

Arabidopsis top hits (Blast detail)Scoree value
AT1G19050.1 ARR7 (RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator8011e-085
AT1G74890.1 ARR15 (RESPONSE REGULATOR 15); transcription regulator/ two-component response regulator6996e-074
AT3G48100.1 ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator5402e-055
AT1G59940.1 ARR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator5195e-053
AT1G10470.1 ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator5178e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information