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Information for unigene UN00477

FASTA Sequence
Unigene ID: UN00477Length: 1479 SSR 
GGAAAAGCTCTCTCATTCATTATCCTTCTCCATCAAAGAGAGAGAGAGCGTAATCATGAACGCCGTGGCATCGAGTTTCGCTCAAT
CTCCCTCCTTTCTTCGTCCAACTCCCAAAACCGCCTCTGGTTCGATTCTCCTGACGTCAAGCTCCCCTGGCTTCATCCGATTCGAT
TCCGGACCTCAATTTCGCCACAGAAACAGCTCTTGTCTTAAACTCTCGAGACCATCGCAAAGCCGAACAACTTCTCTCAAGTCTCG
GACAAGCTTTGTCCTCAAAGCTTCAGCTTCAGCTTCCGGTTCCGGTGATGCGTCCTCCGACTCAATCGCGCCGCTTCAGTTGAAGT
CTCCCGTGGGGCAGTTTCTGTCGCAGATACTCGTCAGCCATCCTCATCTCGTCCCAGCAGCTGTCGAACAACAGCTTGAACAGCTT
CAAATCGACCGAGAAGCTGAGCAACAGATCAACAAAGACTCTTCCTCCTCCTCTCTTCCTCCTACAACAGACATTGTTCTTTACAG
GAGAATAGTTGAGGTTAAGGAGAAAGAGAGAAGAAGAGCTTTGGAAGAGATTTTATATGCTTTAGTTGTTCAGAAGTTCATGGACG
CTAATGTTTCACTTGTACCTTCCATTACCTCCTCCTCTGGGAGAGTTGATACTTGGCCCACCCAAGACGGGACCTCGAGCAGCTTC
ACTCCCCCGAGGTTTACGAGATGATTCAGAATCATCTCTCCATCATTCTTAAAAACCGTGAGGGTGATCTCTCCACCGTGGCGCAG
ATAAGCAAGCTCGGAGTCGGACAGGTCTATGCTGCTTCCGTCATGTATGGCTATTTCCTGAAGCGGATCGACCAGAGGTTTCAGCT
CGAGAAGACGATGAAGATCCTTCCTGGTGGGTCAGATGTAGGAGGTGAGACTACTAGCATTGAGCGAGCCGGGAGGGAATCAGAGA
GAAGCTTCTATGGAGAAGCAGAAGAAGAGAGTTATCAAGCTGTATCCTCAATGGGAGGGATTAATGCCAGTGGTGGTTCCAGCAGC
GAAACAACGAAACAGTCCCGGTTAAAGACGTACGTCATGTCCTTCGATGGAGAAACCCTTCAGAGATACGCTACGATTAGATCGAG
AGAAGCGGTTGGGATCATTGAGAAGCATACGGAGGCCTTGTTTGGGAGGCCGGAGATTGTGATAACACCGCAAGGGATTGATTCGT
CCAAGGACGAGCATATAAAGATCAGTTTCAAGGGACTGAAGAGGCTTGTGTTGGAGGCTGTGACGTTTGGTTCGTTCCTCTGGGAT
GTGGAGAGTCATGTAGATTCGAGGTATCACTTCGTACTGAACTGAAATTGTCTGTGTGTGTTTTTTGGTGATACTTGTAGTTTCTC
TGGGAGGAGCTTTGGTGGGTTTTCTTTGTATTTGTTGCTCTCTGAAAATTTAGATTCATCAATACCTAATGTTAAATTGCTGAATG
AGCTGAGGTTTGCTTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175278 uncharacterized protein [Arabidopsis thaliana]9271e-097
XP_002894114 hypothetical protein ARALYDRAFT_473985 [Arabidopsis lyrata subsp. lyrata]9262e-097
BAJ34170 unnamed protein product [Thellungiella halophila]7236e-074
NP_566588 uncharacterized protein [Arabidopsis thaliana]7228e-074
AAL32564 Unknown protein [Arabidopsis thaliana]7228e-074

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LP80 At1g48450/T1N15_59271e-097
C6TNM4 Putative uncharacterized protein7226e-074
Q0WNF6 Putative uncharacterized protein At3g178007226e-074
Q8W4L9 Putative uncharacterized protein At3g178007226e-074
Q9LVJ0 Gb|AAF02142.17226e-074

Arabidopsis top hits (Blast detail)Scoree value
AT1G48450.1 unknown protein9284e-100
AT3G17800.1 mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem7582e-080
AT3G17800.2 mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem7582e-080
AT1G48450.2 unknown protein6642e-069
AT1G32160.1 unknown protein2823e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
121  50%

Unigene MembersMember information