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Information for unigene UN00546
| FASTA Sequence |
| Unigene ID: UN00546 | Length: 1729 |
SSR | | GAACAGATATGAATTAAATTAAGTTCTTAGCATTCCTCATATCATATAGTTTTCATGTCCCACATGACCAAATCAAATATTCAATT
GTCTGAAACTATGAATGTACAAATTACGAAAGAAAACGATAAATAAAAAAAATAAAATAAAAAGAATTGAGATTTCATTTCATTTC
CTCATCTGGGAGCGTAGGAGACGGTTATATCCGTTGGCCGTTTCATGTTCGTCGCCCACTTCTCCGATTCTAAATACAGCTGCGAT
ATCTTCCCGGCGACTCTTCCCATCTCCGGCCGATTCACCGGATCCTCCACCACGCATTCCAACGCCAGCCGCGTCAGCTTCTCCAC
CACCGTCACCGGAAACGAATCCCCTAATCTCCGATCAATCCACCTCCTCAACCGCCCCTCCGTATCTCCTCCGTCGATCACCACCG
CTTTCGCGGTTTCGATCACCGAAGTCCGCTCAAAATCTCCGGTGGCTTTATCGTACCGATACTTCAGCGGCTCCTCCCCGGAGAGA
AGCTCGAGCATCACGACTCCGAACGCGAACACGTCGGATTCCCGAGTGGCGACCCCGGTGGCTTGAAACTCTGGCGACATGTAGCC
TCTCACTCCTTCGAATCTCTTCGATCGGTCTCTCTCCGGCGTCGTCGTCGTCGTTTCGTTCGTTTCCCCGCATAGCTGCGCGGTCC
CGAAGTGGCAGATCTTCGCGTTGTGATCCGGCTCCGTCACGATCACGGCCGAGCTCTTGATGTGGTTATGAACGAGATTCTCGATC
TTTAATCCCGTCTTGTTGTGGATGTAGTCAAGCCCGTGGGCCAGATCCGTCGCGATTTGGATCCTCGAGGCCCAACTCGACAGCAC
TGTGAAATTAGGGTTCCTAGGGTTCCTCAAGCAATCAGCGAGGGAGGCTCCGTTGACGTACTCGTAGACTAGGTAGATGTGATCGC
TTCCTCCGGAGACGGAAGCGCCGAGCAGGTTGACGATGCTCCCGTGGTGGCTCCGGCAGATATCGGAGAGGCGATCTCTGAGCTCG
TCTTTGGCGATTCTCCGCCTGAACTTTCTCTGGAAGACGACCACCTCTTTCCCGCGCAAATTGCATCGCCACGAGGCTTTGGAGGA
GGAGGAGGATAAGCGGTGGGCGAGGAAGTTGTTGGTGGCGGCGCGAATCTCGGAGACGTCGTAGATGTGGGGGTTCTCCGGTAAGG
TTTCGCGGAGACTAGCGAGGGATGCTCGACTTGCGGCTGAGGAGGAGGAGGAGGAAGCAGCTGTTTTGTTAGAGTTAGAGTTTGAG
GTCGAGCTAGTTCCTGTTGTGCTTGTTGTTGACGGAGATCTTCTTGACGAGTGGTGGTGACTTCCCTGAGATTGGCTTGGGCGTGA
TCGTGATCGTGATCGGGTTGGCTCCGAAGCATTGACGCCCATTTTGGATTTGCACATAGAGACGATGTCTTGTTTAAACGTGTGAA
GGAGACGTACAAAATCATACATTAGATTTAGACGGCGAAGCGATCGCCAAGACAGAGATAGGCGCAATATAGTAGGTATGGACACG
GAGACATGCGCAGTATAGTAAGTGTGGAAACGGCGACAGGAAGAAGGAAAGTCTTCTCGCTTTCTGTCTTTTTCCCCCTTTTTTTT
TGCATCTATGTGGTTAGCAATTTATAGAGAGGTTTTTGTAGCTTTTGTTTTTGTGCACAGGTTTTTGCTAAGCTTAATTCGTATAA
AAATTCTAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191271 protein kinase family protein [Arabidopsis thaliana] | 1792 | 9e-198 |
| XP_002876398 hypothetical protein ARALYDRAFT_486155 [Arabidopsis lyrata subsp. lyrata] | 1753 | 3e-193 |
| CAB72182 putative protein [Arabidopsis thaliana] | 1735 | 3e-191 |
| XP_002271947 PREDICTED: hypothetical protein [Vitis vinifera] | 1143 | 2e-122 |
| XP_002312007 predicted protein [Populus trichocarpa] | 1108 | 2e-118 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| C0LGV0 Probable LRR receptor-like serine/threonine-protein kinase At5g48740 | 300 | 4e-026 |
| P43293 Probable serine/threonine-protein kinase NAK | 259 | 2e-021 |
| Q9SYS7 Putative cysteine-rich receptor-like protein kinase 39 | 250 | 2e-020 |
| Q06548 Protein kinase APK1A, chloroplastic | 248 | 4e-020 |
| Q9SYS3 Cysteine-rich receptor-like protein kinase 40 | 241 | 3e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VYG5 Putative uncharacterized protein At3g57120 | 1792 | 6e-198 |
| Q9M1I8 Putative uncharacterized protein F24I3.200 | 1735 | 2e-191 |
| B9HLJ2 Predicted protein | 1108 | 1e-118 |
| B9HUH6 Predicted protein | 1091 | 1e-116 |
| B9HLJ1 Predicted protein | 1082 | 1e-115 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G57120.1 protein kinase family protein | 1793 | 2e-200 |
| AT2G33580.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein | 319 | 2e-029 |
| AT1G61550.1 S-locus protein kinase, putative | 296 | 9e-027 |
| AT1G61490.1 S-locus protein kinase, putative | 290 | 5e-026 |
| AT1G61500.1 S-locus protein kinase, putative | 276 | 2e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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