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Information for unigene UN00567
| FASTA Sequence |
| Unigene ID: UN00567 | Length: 780 |
SSR | | GGGATATCACAAAGTACATATTCATCTCACTCGATTCTGCGTGAGTGTTCGTTTCGCGAGATCCAAAATCTCTCTGGGATCCAAAG
CTTTGCAACTCCGTGGATCTGCTCCTCTCTCTCTCTCTCTGGATCTCGTACATTGAGCGCTCTAAAAGATGGACAAATCTAGTACC
TTGCTCGTACACTATGACAAAGGGACTCCAGCAGTTGCCAAGGAGATTAAAGAAGCTCTCGAAGGAAACGATGTGGAAGCAAAAGT
TGATGCCATGAAGAAGGCGGTTATGCTTTTGCTGAACGGTGAAACCATTCCTCAGCTTTTCATAACTATTATTCGATACGTGCTGC
CTTCCGAGGACCACACGATCCAAAAGCTTCTGCTGCTGTACCTTGAGCTGATTGAGAAAACAGATTCCAGAGGGAAGGTGCTTCCT
GAGATGATTTTGATTTTCCAGAATCTCCGGAACAACCTTATGCATCCTAATGAGTACATTCGCGGAGTCACGCTGAGGTTTCTCTG
CCGGTTGAAGGAGACTGAGATCGTGGAGCCTTTGACTCCATCAGTGTTGCAAAACCTGGAGCACCGCCATCCGTTTGTACGTAGGA
ATGCAATTCTGGCCGTCATGTCTATCTATAAGCTTCCAAATGGTGAGCAGTTCTTCGTGGATGCACCTGAAATGATCGAGAAAGCG
TTGTCACAGAACAAGATCCGTCTGCCAGAGAAATGCGTTTCTGATGCTTTTTACTTGTGCTGAGGACGAGCTGTGATATCTCTGAG
CATGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB45907 putative protein [Arabidopsis thaliana] | 865 | 8e-091 |
| NP_194877 coatomer subunit beta-2 [Arabidopsis thaliana] | 861 | 2e-090 |
| CAB45908 Beta-COP-like protein [Arabidopsis thaliana] | 861 | 2e-090 |
| NP_194876 coatomer subunit beta-1 [Arabidopsis thaliana] | 860 | 3e-090 |
| XP_002869324 coatomer subunit beta-1 [Arabidopsis lyrata subsp. lyrata] | 856 | 9e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SV20 Coatomer subunit beta-2 | 861 | 1e-091 |
| Q9SV21 Coatomer subunit beta-1 | 860 | 1e-091 |
| Q0JNK5 Coatomer subunit beta-2 | 694 | 2e-072 |
| Q53PC7 Coatomer subunit beta-1 | 686 | 2e-071 |
| Q23924 Coatomer subunit beta | 477 | 4e-047 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RNM4 Coatomer subunit beta, putative | 804 | 6e-084 |
| B9ILF4 Predicted protein | 791 | 2e-082 |
| A5AHP0 Putative uncharacterized protein | 789 | 4e-082 |
| B9N680 Predicted protein | 781 | 3e-081 |
| B9N683 Predicted protein | 781 | 3e-081 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G31480.1 coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative | 865 | 3e-093 |
| AT4G31490.1 coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative | 861 | 1e-092 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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