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Information for unigene UN00584
| FASTA Sequence |
| Unigene ID: UN00584 | Length: 1526 |
SSR | | GCAAACTCTTGTCTTCGATAAAATAAAGAACAACCAACGTGAATACAAACATGAAGATGACGTTCTCCGACGTGCCTTATTCCAAA
GTTTTAAATAATACAAAAATTAAAATAAACAGGGATCCAAAAAGTGGTTCTCAGTTCTTTCACACAAGTTTTTTTCTTCTGGACAT
TAAAGTATCCATATAACAATGAAGATATGCAAGAAGCCATGTTCTTTCATGATATATATATCACAACAGTTTCAGACCGGTTATTA
TCTATTTGGTCGGCCATGTTGCTTGTGCGGACATAATGATCCCCACAATAACTCCAAACAACCCCAGAGCGCTTCCGAAGATCTCA
ATCACAAGAATCTTCACAAAGAGTGTGGAGTTTTGAGCATCAGACAGTGCGCAACTGCTTCCAATGATTCCTACAAATAACCCGCA
TACAAGGTTGGCGAAACCGACAATGATTCCAGATGCGAAGATTGCATATCCAGCTCTAAGCGACTCAGCGTCATACATCTTTGAAG
AAGGAACACTCTCCAACTTCGTTTGAAGGATGATGGCAACAATAACGCCATATATAGCAACAGCTTCACAAAAGATAACACTGATG
AGATTCTTGGAAGTGATACGAGGAGCTTCAATGGCCGCACCGATCAAACTACTTCCCGTTATGTAAATTCCCCAGGCGGCGCCGAG
GACTGAGACGCCGATCGAGATGGCGATTCCGATTGCGGAGAAAGTGTACGGCGAGATCCTTACCAACGCCGCGCCCCACGAGCTCG
CATCGACCATTCCAGACATTCTCTCTCTCTCTCTATCTCTCTCTCTCCTCTCGTATTGCAAGGGTCGTGATGAGAAGATCTGCTTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTAGCTAGCTTCCACGGATCCAAAAAAGTCCTACAATTCGCCTCCTATG
TCGCGTCTGTGAAACAATGGGGGCTAGCTCCGCAGTCTCTCTTGTTCGATTTGGCGTTGGCACAAGTAATCATGAATTGCGCCTGA
AAAAGTGGACGAGGAGGCTGCTATGGCTTGATACTCGGAAACGATTTAGATGCTGCGCAGATATGCTAGCACCGATCCGCCAGTCG
GAGGAACGGCGTTTCGAGCAGAAGACGAGCGCCCATGGAGCCGGAATCAAGCCTTCTTCCTCCGCAATGCCATTTGCTTCTCCCAA
GTCTCGGTTTGTGTCCAAGCAGGAAAAGTTCTACCTTCGTTGCACTCCAAGGCTTACTGGCCCTCAGTCCCGTGATACTCCGCCTA
AAAGAGACACTGGGATTGCTAATGAAAAGGATTGGGGCATCGATTTGTTGAATGAGAATGTGAATGAATCTTGGATCAACGAAGAT
GGCAGTACTTGGTTCAGAGAAAGCGGACAGGACCTCGGAGAAAATGGATACAGATGTAGGTGGACTAGGATGGGCGGTCGATCCCA
TGATGCTTCTTCTGAGTGGACTGAAACGTGGTGGGAGAAAAGTGACTGGACCGGATGCAAAGAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_180132 V-type H+-transporting ATPase 21kDa proteolipid subunit [Arabidopsis thaliana] | 832 | 2e-086 |
| XP_002880688 H+-transporting two-sector ATPase [Arabidopsis lyrata subsp. lyrata] | 832 | 2e-086 |
| NP_194979 ATPase, F0/V0 complex, subunit C protein [Arabidopsis thaliana] | 831 | 2e-086 |
| XP_002891237 hypothetical protein ARALYDRAFT_473738 [Arabidopsis lyrata subsp. lyrata] | 808 | 9e-084 |
| NP_174971 uncharacterized protein [Arabidopsis thaliana] | 792 | 7e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P23968 V-type proton ATPase subunit c'' | 509 | 2e-050 |
| Q2TA24 V-type proton ATPase 21 kDa proteolipid subunit | 471 | 5e-046 |
| Q99437 V-type proton ATPase 21 kDa proteolipid subunit | 471 | 5e-046 |
| Q91V37 V-type proton ATPase 21 kDa proteolipid subunit | 471 | 5e-046 |
| O14046 Probable V-type proton ATPase 20 kDa proteolipid subunit | 465 | 2e-045 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SLA2 At2g25610 | 832 | 1e-086 |
| Q9SZY7 H+-transporting ATPase-like protein | 831 | 1e-086 |
| Q6S9B3 V-ATPase subunit c'' proteolipid | 778 | 2e-080 |
| B4FZS8 Putative uncharacterized protein | 776 | 3e-080 |
| C6T3I8 Putative uncharacterized protein | 772 | 9e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G25610.1 H+-transporting two-sector ATPase, C subunit family protein | 833 | 4e-089 |
| AT4G32530.1 vacuolar ATP synthase, putative / V-ATPase, putative | 832 | 6e-089 |
| AT1G42430.1 unknown protein | 797 | 6e-085 |
| AT4G32530.2 vacuolar ATP synthase, putative / V-ATPase, putative | 575 | 3e-059 |
| AT1G75630.1 AVA-P4; ATPase | 247 | 4e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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