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Information for unigene UN00592
| FASTA Sequence |
| Unigene ID: UN00592 | Length: 973 |
SSR | | CACGGTAAAGTACAAAACCGACGACGGCGACTTTCCCCATGATCTGAGTTTCTGAACCAAAGGTCTTCCCCTGAATTTCACGGGAA
TCTCCGATTGTTTTTCGGGTAAAATTATTCGTATTTTCTCTCTCTCTCTCTCTCCTACATTGTTTATCAGAGCCAGAGCTACGTGG
CAGCTTGTCGGAAAATAAAACTTCCGCTGACGGTGACGGTGAAGAAGAAGAGGCAAGTATAGTTTCTCTTTTGATCCAACACCTAT
CGAAACTCAAAGGTTTCTACTTCACGACACCGTTTCGGATCTCTGTTTTTGAGATCCTTCACCGTTACCGCGTAAATGGATCCGAC
TTCTCGACCCGCTGTTGTCATCGACAACGGAACCGGGTATACAAAGATGGGATTTGCGGGTAACGTAGAACCATGTTTCATTCTTC
CCTCGGTAGTTGCAGCTAACGAGTCTTTCCTGAGCCAACCCAAGAGCTCTTCAAAAGGTTCTTCTTGGGCAGCTCAGCACAACGCT
GGAGTCGCGGCCGATATGGACTTCTTCATCGGAGACGAAGCTGTTACCAAGTCACGGTCTAGTAGCACTTACAACCTTCGTTATCC
CATCGAGCATGGTCAGGTCGAGGACTGGGATGCTATGGAAAGGTATTGGCAGCAGTGTGTGTTTAACTACCTGAGGTGCGATCCAG
AGGATCATTACTTTCTTCTCACCGAAAGCCCTCTCACTCCTCCTGAGAGTCGAGAGTACACTGGAGAGATTCTGTTCGAGACTTTT
AATGTCCCTGGGCTTTACATTGCTGTTAACTCGGTGCTTGCTCTTGCAGCTGGGTACACTACTTCCAAGTGTGAGATGACAGGGGT
TGTAGTTGATGTCGGAGATGGCGCGACTCGTGTTGTACTGTTGCAGAAGTTATGTTATTGGGAGCTGTATCAGACGGTCCGATGCT
GGCAAAGATGTCACCCTCTTTATCAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889991 hypothetical protein ARALYDRAFT_471471 [Arabidopsis lyrata subsp. lyrata] | 911 | 5e-096 |
| NP_172777 actin-related protein 3 [Arabidopsis thaliana] | 910 | 7e-096 |
| XP_002515041 protein binding protein, putative [Ricinus communis] | 877 | 5e-092 |
| XP_002315648 predicted protein [Populus trichocarpa] | 869 | 4e-091 |
| XP_002312654 predicted protein [Populus trichocarpa] | 865 | 1e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SAF1 Actin-related protein 3 | 915 | 8e-098 |
| A2X6S3 Actin-related protein 3 | 815 | 3e-086 |
| Q6K908 Actin-related protein 3 | 815 | 3e-086 |
| Q9N4I0 Actin-related protein 3 | 554 | 6e-056 |
| Q61WW9 Actin-related protein 3 | 547 | 4e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RMS2 Protein binding protein, putative | 877 | 3e-092 |
| B9HTF8 Predicted protein | 869 | 3e-091 |
| B9HLD3 Predicted protein | 865 | 8e-091 |
| B8LL38 Putative uncharacterized protein | 825 | 3e-086 |
| A5CLG6 Actin-related protein 3 | 817 | 3e-085 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G13180.1 DIS1 (DISTORTED TRICHOMES 1); ATP binding / actin binding / protein binding / structural constituent of cytoskeleton | 915 | 7e-099 |
| AT5G09810.1 ACT7 (ACTIN 7); structural constituent of cytoskeleton | 283 | 1e-025 |
| AT2G37620.1 ACT1 (ACTIN 1); structural constituent of cytoskeleton | 280 | 3e-025 |
| AT2G37620.2 ACT1 (ACTIN 1); structural constituent of cytoskeleton | 280 | 3e-025 |
| AT3G53750.1 ACT3 (actin 3); structural constituent of cytoskeleton | 280 | 3e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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