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Information for unigene UN00652
| FASTA Sequence |
| Unigene ID: UN00652 | Length: 1441 |
SSR | | GGTCTAACATGGTCTAAGATTTTATACATAAGAAGTGATAGGTTACTACAAAGAAAACAAATGATGAAATATACAAACCCTCTCCA
ATCAATACCAACCCACATTCAAGTGACTGGGTTGAAAAGAAACAAAAGAACATGAACATAAACAACCCCAAGCCTCGTCAACTACC
AAAGCACACAACCCCTCTCTCTCTCTCTCACATCCATGAAATGGAGTGTTAACAAATGAAAAAGGCAAAGAAGATGAACTATGAAC
CTCAATAATGCAATTTCCTCATATACAGACAGAGATTCTATCTTCCCATGTACTCCGTATTCCTCAAGTACAGTAGTTTCCTCGAT
TGCGCTGGAGGAGCTAATCCTGGGATGTCCCTAATGTCCTTGTTGTTCGGGTGTACGATCTGAATATAGTTTAACAACAACATACA
AACAAAAAGTTACAACTTTCCAATGAACAATCACAACTTTCATTGGAATGAGCAATGTACCTTCACTACGATAATGGCTATCACAC
CGCATACAATGAGAAACAGGAACATCATTATGCATTTATCAGTAGCCACCTGTCTCCCTATCTCTTTCACAAGCTGGGATGCTTTC
TTGATAGAGAACTGAATCGTGTCTAAGTGGTTCACAACGCGTCCCATTTGATCTGTCTGTCCCTTTAAATTAGCTGCAGTTTGAGT
TCCAACTTCAATTGTTTGTTCTACAACCTGTTTTGAGCGCTCAATGGCCTGATCAGTCTCATCCATTCTTTTCATTCCAGCATCAA
CAAGCTCCTGGTTGACATAGCTGAAGCCACTTGAACGTTTTCGTCAGCAGTAGGTTCGGCGCTGGGTCCAGCACCCATATCAAAAA
GTTCAATCTTCTTGTTGCCAAGGGTACTCATATACGTTTTTCTTAGTGCAACATAAGAATTGAGTTCCTTAATCATAGATTGTTTC
TCATCATTCAATTGCTTATTTACTTCGGGAGGATTTGAAGCTTCCTCGTCCTTGAGTTCACGGTCAAAATCCTTTACCAACCTTTT
ACAGTCTCTCATCTTATCAGTGTGTTCCTCGAGTTGCTTGCTTTGTCTAGTTGAATCCTTCATCTTATCCAACCTCTGGAATCCAT
TCCTGCAATAACAGAACAACCATCAACAATCTCTTAAATCGAAGTTATAAGAAAGAGGAGAAAAAGCATTACGCGAGGGCTCGGAA
ATGGTCACGGATTTCGCCATGGATCTGCTCCAATTGAGGGCTCATCGGGATATTTGAAGCCATCTCGCCGGAGATATTCACAACTC
CGACGATTAATCAAATCAGAACCCTAAAGAGTACTTAAACACACACAGAAACAACAAAAGCCCCCAAAACGATAAAAACCTTAGCT
TTTGAGGATTAACTCAAGTTAAAGAGGCTTCTCCAGAAAACGGAAGGAAATTCAAATTAATATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566578 Novel plant SNARE 13 [Arabidopsis thaliana] | 515 | 8e-050 |
| AAM61208 unknown [Arabidopsis thaliana] | 515 | 8e-050 |
| NP_001030716 Novel plant SNARE 13 [Arabidopsis thaliana] | 515 | 8e-050 |
| XP_002885211 NPSN13 [Arabidopsis lyrata subsp. lyrata] | 511 | 2e-049 |
| NP_175258 Novel plant SNARE 12 [Arabidopsis thaliana] | 480 | 9e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LRP1 Novel plant SNARE 13 | 515 | 3e-051 |
| Q9LNH6 Novel plant SNARE 12 | 480 | 4e-047 |
| Q944A9 Novel plant SNARE 11 | 366 | 6e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2V2S5 Putative uncharacterized protein At3g17440.2 | 515 | 5e-050 |
| Q541Y4 Putative uncharacterized protein At1g48240/F21D18_3 | 480 | 6e-046 |
| B9S000 Novel plant snare, putative | 467 | 2e-044 |
| C6TAL6 Putative uncharacterized protein | 466 | 3e-044 |
| B9HXA1 Predicted protein | 445 | 7e-042 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G17440.1 NPSN13 (NOVEL PLANT SNARE 13) | 515 | 3e-052 |
| AT3G17440.2 NPSN13 (NOVEL PLANT SNARE 13) | 515 | 3e-052 |
| AT1G48240.1 ATNPSN12; protein transporter | 480 | 3e-048 |
| AT2G35190.1 NPSN11 (NOVEL PLANT SNARE 11); SNAP receptor/ protein transporter | 368 | 3e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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