|
Information for unigene UN00658
FASTA Sequence |
Unigene ID: UN00658 | Length: 1495 |
SSR | | GACTTTCGAAATTTGGCGCAGGATGAGTTTGAGAGGAAGGATATATCCCTTATGGATCAGGATCACCCTGGATTTCCCACTTCTTT
GACTAACACCGATGGAGTTCCTATCGATTATAGCTTCCCACCATGCAGTCTGAGAAAGTTGCTCCAACTCAGTTAAATCCGCAAAT
CCACTTTGATGGGAATATTCAGCCGGATGTGTCTACCACTGCCGTAGCTGATTCGAGCACAGTAGACACACAAGGAGATTACGGTC
AGTCAGTGTTCAAAGGTGCTGAAAGCACAGATGCAAAAATGAATACTGGAGTTCCTCTTATTGACCTTGTTGCTGAGGACAGTGCC
GACAGGTCTCTGCAGGTCATTAAGAACGACGACTTGGAAGAACTGAAGGAACTAGGTTCTGGTACCTTTGGAACTGTTTATCATGG
AAAATGGAGGGGTACAGATGTTGCTATCAAGCGGATTAAAAGGAGCTGTTTTATTGGTCGTTCATCTGAACAAGATAGACTGACCT
CGGAGTTTTGGCATGAAGCTGGAATTCTTTCCAAGCTACATCATCCAAATGTTATGGCATTTTACGTCATAGTGAAAGATGGGCCA
GGAGGAACTTTAGCTACAGTGACAGAGTACATGGTCAATGGATCGCTTAGACATGTTCTTCTCAGCAACAGGCAGATTGATCGACG
TAAGCGACTTATCATTGCAATGGATGCAGCTTTTGGTATGGAATATTTGCACTCAAAGAACATAGTTCATTTCGATTTGAAGTGTG
ACAACTTGCTTGTCAACTTAAAGGATCCCGCCAGACCGATATGTAAGGTTGGTGATTTTGGTCTGTCAAAGATAAAAAGAAACACT
TTGGTAACTGGCGGTGTAAGGGGAACCCTCCCTTGGATGGCTCCCGAGCTACTTAGTGGCAGCAGCAGCAAAGTTTCTGAAAAGGT
CGATGTGTTCTCTTTCGGAATCGTCTTGTGGGAAATTCTTACCGGTGAGGAACCATACGCCAATATGCATTACGGTGCAATAATCG
GAGGCATAGTGAACAATACACTGAGACCAGCCGTGCCAAGCTACTGTGACCCAGAATGGAGGATGCTGATGGAGCAGTGCTGGGCT
CCTGACCCATTTGTTCGACCTTCCTTCCCAGAGATAGCCAGACGTCTCCGTACCATGTCCTCCTCTGCAGTCCAGACAAAAGCTCA
AGCCGCCAATCATCACCACAAGTAATCTGTCAGTTTATCATTGCGGGTACGTAAAAAAAAAGGTATGGTCTGTGTATATAAAACAT
ATCCTTTCTGCTTCTTTCTGATTTCAGAGTTGACAGTTTTAAAAGGTGTGTTTATTTCTCCAAGAAACCCTAAAACAGATATTCAT
ATTTTGTATAGCCATTATTATTATTATTTAGTGTAAGTAAATTTGGTTTTGGTATTATGACTTGGACTACTACTTCTGTAGTCGGG
GAGTCTTTTTCCTTTTCAATAAAAGTTTCACAC
|
|
|
GenBank top hits (Blast detail) | Score | e value |
XP_002879531 kinase family protein [Arabidopsis lyrata subsp. lyrata] | 1734 | 4e-191 |
NP_181050 octicosapeptide/Phox/Be.1 domain-containing protein kinase [Arabidopsis thaliana] | 1727 | 2e-190 |
ABK06418 HA-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] | 1468 | 3e-160 |
XP_002276237 PREDICTED: hypothetical protein [Vitis vinifera] | 1343 | 8e-146 |
CBI27196 unnamed protein product [Vitis vinifera] | 1343 | 8e-146 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q55GU0 Probable serine/threonine-protein kinase DDB_G0267514 | 420 | 4e-040 |
Q05609 Serine/threonine-protein kinase CTR1 | 400 | 8e-038 |
Q54TA1 Probable serine/threonine-protein kinase drkC | 380 | 2e-035 |
Q02779 Mitogen-activated protein kinase kinase kinase 10 | 375 | 6e-035 |
Q16584 Mitogen-activated protein kinase kinase kinase 11 | 375 | 6e-035 |
TrEMBL top hits (Blast detail) | Score | e value |
O64768 Putative uncharacterized protein At2g35050 | 1727 | 2e-190 |
B9RHZ4 Serine/threonine protein kinase, putative | 1325 | 7e-144 |
B9RHZ3 Serine/threonine protein kinase, putative | 1319 | 3e-143 |
C3SA69 Serine/threonine protein kinase (Fragment) | 1312 | 2e-142 |
Q9SA26 F3O9.7 protein | 1310 | 4e-142 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G35050.1 protein kinase family protein | 1728 | 7e-193 |
AT1G16270.1 protein kinase family protein | 1310 | 2e-144 |
AT1G79570.1 protein kinase family protein | 1310 | 2e-144 |
AT1G04700.1 protein kinase family protein | 1177 | 5e-129 |
AT3G24715.1 ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 1164 | 2e-127 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|