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Information for unigene UN00660
| FASTA Sequence |
| Unigene ID: UN00660 | Length: 1386 |
| SNP | GAAATGAACCTTTTTTAATTTAGAAATTTATAGTTTTACTAGTAGAACAACAAAACGAGACATAGTTACAATGGTCGTCTACTAAA
CAAATATGATTGTAAGATTCTTAAATCTCTTAAGAATTCGTAGACGTAGAAACACCTTCACCGTAAAGCTAACAGTGGGAACTAGC
GTGCTCAGGTTTGTGAGTATACTCATAATCAAGATGCACAAAAGCCCTTTCAATCTCCTGCAGCTGCTCCAGCTTCTCCTGCAGCG
CTTCTCCGATATCATGCGCCACTTGCAGAGGCATATCAGCGGGGAGAACTATATCAACCTCCACAAAGTAATGAGACCCGAACGTG
TACGCCCTCACCGTGTCGATGTGCCTAATCTCTCTGTGGTGGTTCCAACACAGGTAAGTCAGCTTCTGCAGATACTCCGGCGTCGC
TGATTTGCCTACGAGAGAGTTCACGTTCTCCAGAACCGTCATCGACCATGTCCTTATAGTGTACAGTGCGAGAATGATGGCACCGA
GTGGATCCATCCAGTTATCGAAGTAGTTAGCGAGGATGACTGCGATGAGTCCGATGATGTTTGTGATGACGTCGAAGAAGTGGTCT
TGAGCATAGGCTTTAACGATCTCGTTGCTGAATGATCTGCAGTAAAGAACGAGGAGGAGTTTGACTAGTGTGACGGAGAGCATGAT
CCCAACCACCCAACTCTCTTGTTCCTTTGTTAAGCTGAACTCTTTGTGACTGGACACCATGGTGCGAAGAGACTCCAGGATGATCT
GCAGTCCAAGCGTGGCCATTACGGACGCAAAGACGAGGATACCGAGCGGCTGCATCCGTTTCTTCCCGATGGGATACTGATAAGGG
TTCGGCGTCTGCATGGAGAAGGCGGTGAACCAGAGGATGAAGCCGGAGAGGAGATCGAGGAGAGAGTCTAGCGTGGAAGCGACGAT
GGCTAGAGAGCCGCTCGTGACGGAGGCGTAGACTTTAGCGGCGAAAAGAACCATGTTCGCGATGTTTGATATTCTGATGGCTAACG
TCTCGCTTTTAGCAAGATTGTCTTGCTCTTCCTTTGACATTCCGGGGACGAATCCACGTTCTGCGAGTTCGTCCATTTCGGTGAAG
CCTTCAAGCATCTCCACCTGCTGCTGGTAGTAATCTGCCACATTGTCTTCCGGACCCAAGCAGCCAAGACAGTTATGGAGTTTGCT
TGGAGATTTCTTCTCCTTGTGCTCAGGAGAAACCTGAAAATCGTCGAAGTTCAGCTGCCACGAGCGGTCGCCCTCGCCGTGAAACT
CGAGAAGAGAGATCTCTTCGTCGGCGTTTTCGATAGATGGCCTAGCCATTGGATAGAGATTCGTGTACGGCCGCTGCTGCTAGCAT
TACAGGGAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181477 putative Mn-specific cation diffusion facilitator transporter [Arabidopsis thaliana] | 1925 | 2e-213 |
| XP_002862450 cation efflux family protein [Arabidopsis lyrata subsp. lyrata] | 1921 | 7e-213 |
| XP_002881656 cation efflux family protein [Arabidopsis lyrata subsp. lyrata] | 1907 | 3e-211 |
| XP_002533664 cation efflux protein/ zinc transporter, putative [Ricinus communis] | 1734 | 3e-191 |
| XP_002315247 metal tolerance protein [Populus trichocarpa] | 1675 | 2e-184 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M2P2 Putative metal tolerance protein C3 | 928 | 4e-099 |
| Q9ZCC5 Protein p34 | 185 | 6e-013 |
| P21559 Protein p34 | 135 | 4e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O80632 At2g39450 | 1925 | 2e-213 |
| B9T5Z5 Cation efflux protein/ zinc transporter, putative | 1734 | 2e-191 |
| A4ZUV2 Metal tolerance protein | 1675 | 2e-184 |
| C6TIR9 Putative uncharacterized protein | 1675 | 2e-184 |
| B7FHN3 Putative uncharacterized protein | 1671 | 5e-184 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G39450.1 MTP11; cation transmembrane transporter/ manganese ion transmembrane transporter/ manganese:hydrogen antiporter | 1926 | 7e-216 |
| AT1G79520.1 cation efflux family protein | 1188 | 3e-130 |
| AT1G16310.1 cation efflux family protein | 1174 | 1e-128 |
| AT3G58060.1 cation efflux family protein / metal tolerance protein, putative (MTPc3) | 928 | 4e-100 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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