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Information for unigene UN00661
| FASTA Sequence |
| Unigene ID: UN00661 | Length: 1617 |
SSR | SNP | GGTATAAATAGATATTCATTCCTCACATATCGTATAATAATTAGTAGAAACTTACATCGCAGGCATGAAATAACAAAAACATTCAG
GTTTCCAAGTGAGACTTGCCGGTTTTTTTTTTTGAGAGAGAAATTAAAAAGCCTATTTTCACGAATTTACACAAATTGTATTCAAA
CAAAACAAAAACAAATGAAATAGTGAGTGATATGATGAAGCGTGGGATCAGATTTGGAGGATATCAAATCAATAGGGGTTGTTCCT
GTGAGGAGTTTGAGGAGCAGAGCGAGGAGGATTGAGCAGAGGCTGAAGAGCCTTCACCACTATGCTCATGTTTGGCCTGAAGTCTG
CCTCATATTGTACACATAGCGCAGCTACAGCAGCCAGCTTGGCAACAGCCTTGGGAGGATATTCTCCGTTTAGTCTTGCATCAACG
CACTGCTTCACCTTGTCTTCACTCAGTTTAGGAGTTGCCCATGTAACGAGACTCTGTTGTCCTCGGGGTAAGGTATGATCAACTGG
TTTACGACCTGTGAGGAGCTCTAGCAGAACAACCCCAAAACTATACACATCACTCTTTGTGCTCAATGTTCCTGTCATTGCATACT
CTGGAGCATGATAACCGAAGGTTCCCAACACACGAGTTGAGTGAAGGCGAGCAGCCATGTCAGGGGCTTGGTTGGAGAGATCGAAA
TCAGCAATCTTAGCAACATCATCGTCAAACAGAAGAACATTGCTGGATTTGATGTCTCGGTGGACAACATGAGGGTTCGCCTTCTC
ATGCAAGTACTCCAGTCCCCTAGCCGCACCAACCGCTATTTTAACTCTCTGGTTCCACGACAGAACAGGTCCAGGCTGTGCTCCTT
TCACTCCTTTCCTACCATGAAGAATATCATGAAGAGAGCCATTAGGAGCAAACTCATAAGCGAGCACACGGAGTGGGCCATCAACG
CAATATCCCAAAAGTGCAACAACATTGTCTTGTCGCAATCTCGAAACCATTGATACCTGGGCGAGAAACTCTTGATCAGGTTGCTT
ACTGGAATCAAGTTTCTTAATGGCAGCAGCCTTGCCGCTTCTAAGAACACCGTAGAACACTCTTCCATAAGAGCCCTCACCAATCA
AGGACTTTGAACCATAGTTATCGGTTATGTCCTTCAGCTCATCAGCTGGAATGGCCGGCACAGAGATGGGCTGCATCTGAATGACT
GGCGTGTTCTTTGGCGGGTCTGTCCTTGCATGGTGAACTCCACCGTGACCTGCTGCGCCGTAGACAGGCTTAGGACCAGTTTCAGC
AACTCTACGAAAATCGTCACCACCACAACAACCAAAGCAGCTCATTACGCTCTTCTCTCACAACACAAACCACACTTTTTCCAAAA
CAAAAGAGAGAGAGAGAAGACTGAGTGTGGTTGAATCTTCTTCCGATGAAAGGAGAAGAAGAAGGGTAGGGAGGATTTTGACTATA
TCTTCTTATACGTATGGTTGGTGGCGAAGCTTTAGGCTTAAGAAGGCAGAGGGCAGACTTTTCTTCCCGGCGGAAATTTCTTATTA
AAGGTGTTTGGAGCAGATGCGCACGATAGCTTACTTCTTCTTCCAAGTTCCAAGTTGTAGTCCTCCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883060 hypothetical protein ARALYDRAFT_479217 [Arabidopsis lyrata subsp. lyrata] | 1801 | 7e-199 |
| NP_188367 putative serine/threonine protein kinase [Arabidopsis thaliana] | 1784 | 7e-197 |
| NP_175255 serine/threonine protein kinase [Arabidopsis thaliana] | 1650 | 2e-181 |
| AAK96869 similar to Pto kinase interactor 1 gb|AAC61805.1 [Arabidopsis thaliana] | 1644 | 1e-180 |
| AAF79541 F21D18.6 [Arabidopsis thaliana] | 1538 | 2e-168 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q41328 Pto-interacting protein 1 | 1513 | 7e-167 |
| O80719 Probable receptor-like protein kinase At2g47060 | 1448 | 3e-159 |
| P93749 Probable protein kinase At2g41970 | 1188 | 4e-129 |
| Q3EDL4 Probable serine/threonine-protein kinase At1g01540 | 583 | 5e-059 |
| Q8L4H4 Nodulation receptor kinase | 550 | 3e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LUT0 Putative uncharacterized protein At3g17410 | 1784 | 5e-197 |
| Q93Y19 Similar to Pto kinase interactor 1 | 1644 | 8e-181 |
| Q9LNH4 F21D18.6 | 1538 | 2e-168 |
| B2CZJ8 Pto kinase interactor 1 | 1514 | 9e-166 |
| B9RN61 Serine/threonine-protein kinase PBS1, putative | 1507 | 6e-165 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G17410.1 serine/threonine protein kinase, putative | 1786 | 1e-199 |
| AT1G48210.1 serine/threonine protein kinase, putative | 1652 | 5e-184 |
| AT1G48210.2 serine/threonine protein kinase, putative | 1652 | 5e-184 |
| AT2G47060.1 serine/threonine protein kinase, putative | 1448 | 2e-160 |
| AT2G47060.2 serine/threonine protein kinase, putative | 1448 | 2e-160 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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