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Information for unigene UN00683
FASTA Sequence |
Unigene ID: UN00683 | Length: 616 |
SSR | | TATTGTATCATTGTCATACACCTAAGTATACACAACAAATATAGCAAAGTTACAAAAACAAATAAACAAATAAGAAGTTACAACAA
TGTGAAACTTAAGATGCAAGCAAAAAAACATTCAGTAACTACAACAAAACAACTAAACCTTCTCATTGTTCTAAAGATGACTTATC
TCTTTTCCTGCTAAAAAACTTAACCAAGTTGGGAACCTTCTTCTTCTTCTTCTTCTTGATCACAAAGTAACTCGGAGTCCCTCTGT
TTCCCGACGAGTATCTCCTCGTCTTCCCTCCCTGAACCGGAGTGAACTTCCCGCTAATCCTCACCGACCTTCTCACCGGTTTAGGA
GAGACCACCAAGCTGCTGCTGCTTTTGTCTTCTGCTGATTCCTCCTTGAACTTCTCAATCTCGTTCTGCACCAGTCTTTTTATCGA
CAGCGACCTCTGCATCCTAAACGACGCCCTCTCCTCTTCCACCATTGTCTTCCCACTCTCCCTCTCTAACGTCTCCGTCTTCATCA
CTATCTCCTTAGTGCTCGCCTTCAGCGCTTCCACCCACGCCATCGCTGCTTCCACTTTCTTCTCTGCTGTTTCTTCTGCGTGACGC
GCTTGTCCACTCAG
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GenBank top hits (Blast detail) | Score | e value |
XP_002888550 predicted protein [Arabidopsis lyrata subsp. lyrata] | 570 | 8e-057 |
NP_176856 plastid movement impaired 2 protein [Arabidopsis thaliana] | 560 | 1e-055 |
BAB11282 unnamed protein product [Arabidopsis thaliana] | 262 | 4e-021 |
NP_198631 plastid movement impaired 15 protein [Arabidopsis thaliana] | 262 | 4e-021 |
XP_002528078 Myosin heavy chain, putative [Ricinus communis] | 259 | 9e-021 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9C9N6 Protein PLASTID MOVEMENT IMPAIRED 2 | 570 | 4e-058 |
Q9FF41 Protein PLASTID MOVEMENT IMPAIRED 15 | 379 | 5e-036 |
Q17RH7 Putative protein TPRXL | 121 | 4e-006 |
TrEMBL top hits (Blast detail) | Score | e value |
B9SQ09 Myosin heavy chain, putative | 259 | 6e-021 |
B9H332 Predicted protein | 243 | 4e-019 |
B9GNB8 Predicted protein | 239 | 1e-018 |
A5C9E2 Putative uncharacterized protein | 226 | 4e-017 |
C5XHF8 Putative uncharacterized protein Sb03g031810 | 180 | 9e-012 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G66840.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: PMI15 (plastid movement impaired 15) (TAIR:AT5G38150.1); Has 66436 Blast hits to 37670 proteins in 1596 species: Archae - 890; Bacteria - 7464; Metazoa - 33216; Fungi - 4897; Plants - 2570; Viruses - 192; Other Eukaryotes - 17207 (source: NCBI BLink). | 571 | 3e-059 |
AT5G38150.1 PMI15 (plastid movement impaired 15) | 390 | 3e-038 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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