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Information for unigene UN00715
| FASTA Sequence |
| Unigene ID: UN00715 | Length: 1323 |
SSR | | AAAAAATCATCCGTAGATTGAATCAAGAAATGACTGAAGAACATGTTTGTGACATTATGAGAATAGGTAGCAGCATCTTTTTGTTC
TCCTCCCAAACTCACAATTTATAACAATAATAAAACCAAACTTAACGTTAAACACATATGAGTTGTCTATTGAGACAGTATCAGCA
TCAAAAAGCTTTTTTTTTTCAAAGTGAGAAGAGTTCCTTCCTAGTTCCTTCTAATGGTCTTTGATGGAACAAGTATTCCCAAACGA
GGAGGACGTATCTTAAGCACTTCCTCCTTAGCAATGGTCTGTCTTATCTTTTTGTTCAGTTTCTCCTTATCTTCTTCGGCTATTTC
TTTTATTATTTTGGGCAAGCTGTCAATCTCCTTTGATAACTTCTCTTTATGCTTCTCCTTTGTCTCCTCTTCTCGTAGCGCCTTTT
GTCTAGCTCGCTTGTTCACACCACACGTGTCACCCTCTTTGTGGTTCTTGCGGTTTTATTCCCAGCTTCAGACACTTCATTTGCAG
CGTCAGCTTCCTCTTCTTCACCTTCGCTACCATTGTCCACACCAAGAAAGTAGGTACTCTTTCCATTGATTATTCTATTGCATACG
CTCAGGAGACCAGCCTCGTCTTCGATGTTGTTGTTTCCATCGATAGTCAAGGGAACAGGCTCAGGTCCTAACTCGGTTTTGTAAAC
TTTCTGCATTTCTTGAGCAACTGCTTCAGCCAACATATCCTCGTGACTTTCAGCTGTAGGGTTGTATGAGCATCCTGCAGGATCAA
CTTCTACTGCCGGAATAGTCGAATTCGTTTTCCAAATCTTTCTAGGGTTGCTCTCATGTTCTCCTTTATGATCATCGCCCCACAAG
TCCATCATTACAGAATCATCATCAACATTATTTTGAGCTTGTTTAGGTGGTTTGCTTTCTACAGCGCTTGTCTTCTTCTTCTTACT
GATCTTTGACTTGGGCTTGGAAGATGACACCACCTGGACAAATGGGTTCTTCTTTAAAACACTGTCACACCGAAGCACTTTCTCTC
TGTTCTTCTCAATCTTACGTTTCACCGGGAGGTCGTGAGATTTCTGGACGCGGAAGAGGTTCTCGCTGGGAGCGGCGGAGAGATTG
CCACCGGAGAGAGCGTCTTTGGTGGTTTTGTCGAAGAAGTCTTCGATGTCCTCGGTGCTTATGTTAGCTCTCCATGCTTTTTTACC
CTTTCCTTGAACTCTTAGAACCCTTCCCCATCTCGCCTCTCTCTCTCTCTCTCTTTCTCTCTGTGTCGGTTTCTCTCGGCGGCGTG
AAGATTGGTTTGGTGTTCAAAGAGGAGGAAGGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002881721 hypothetical protein ARALYDRAFT_903334 [Arabidopsis lyrata subsp. lyrata] | 809 | 6e-084 |
| AAM64972 unknown [Arabidopsis thaliana] | 804 | 2e-083 |
| NP_565931 uncharacterized protein [Arabidopsis thaliana] | 796 | 2e-082 |
| NP_001078030 uncharacterized protein [Arabidopsis thaliana] | 796 | 2e-082 |
| NP_001189721 uncharacterized protein [Arabidopsis thaliana] | 796 | 2e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O22892 Uncharacterized protein At2g40430 | 796 | 8e-084 |
| Q9UUI4 Uncharacterized protein C22F8.09 | 138 | 2e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LB48 Putative uncharacterized protein | 804 | 1e-083 |
| C6T7P0 Putative uncharacterized protein | 582 | 8e-058 |
| B9S4A4 Putative uncharacterized protein | 572 | 1e-056 |
| C6TLJ1 Putative uncharacterized protein | 558 | 5e-055 |
| B9HHX4 Predicted protein | 556 | 9e-055 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G40430.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tumor suppressor protein Gltscr2 (InterPro:IPR011211), P60-like (InterPro:IPR011687); Has 601 Blast hits to 544 proteins in 148 species: Archae - 0; Bacteria - 22; Metazoa - 201; Fungi - 103; Plants - 32; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink). | 796 | 7e-085 |
| AT2G40430.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tumor suppressor protein Gltscr2 (InterPro:IPR011211), P60-like (InterPro:IPR011687); Has 608 Blast hits to 551 proteins in 148 species: Archae - 0; Bacteria - 22; Metazoa - 203; Fungi - 106; Plants - 34; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink). | 796 | 7e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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