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Information for unigene UN00725
| FASTA Sequence |
| Unigene ID: UN00725 | Length: 821 |
SSR | | GGGATTCACATCTTTCTTTTATACACACCTTCAAAACTCTCTCTCTCTCTCTCTCGTGAAAGATTAAAACCTTTGGAAGAAGAAGT
CGTTTCGTTACCATTCGACAATGGCGGAGGACGTTGGGATTCTGGCTATGGACATCTATTTTCCTCCTACCTGTGTTCAACAGGAA
GCTTTGGAAGCTCATGATGGTGCAAGCAAAGGCAAATACATCATTGGTCTTGGCCAAGATTGTCTGGCTTTCTGCACTGAGCTTGA
AGATGTTATCTCAATGAGTTTCAATGCGGTGACATCTCTTCTAGAAAAGTATAAGATCGACCCCAAGCAAATTGGGCGTCTTGAAG
TAGGAAGTGAGACTGTCATTGACAAAAGCAAGTCCATCAAAACCTTCTTGATGCAACTCTTTGAGAAATGTGGAAACACTGATGTG
GAAGGTGTTGACTCGACCAATGCTTGTTATGGTGGAACTGCAGTTTTGCTAAACTGTGTCAATTGGGTTGAGAGTAACTCCTGGGA
TGGACGCTATGGCCTTGTCATCTGTACTGACAGTGCGGTTTATGCAGAAGGACCTGCAAGGCCCACTGGAGGAGCAGCAGCGATTT
CTATGTTGATAGGACCTAATGCTCCTATTGTTTTCGAAAGCAAACTGAGAGGAAGCCACATGGCTCATGTCTATGACTTTTACAAG
CCAAATCTTGCTAGCGAGTACCCTGTTGTTGATGGTAAGCTTTCACAGACTTGCTACCTTATGGCACTTGACTCCTGCTATAAACA
TTTATGCAAAAGTTTGAGAAACTCGAAAGCAAAGAGTCTCCATCATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAF69804 HMG-CoA synthase [Brassica juncea] | 1169 | 5e-126 |
| AAG32923 HMG-CoA synthase [Brassica juncea] | 1169 | 5e-126 |
| 2F82 Chain A, Hmg-Coa Synthase From Brassica Juncea In The Apo-Form | 1164 | 2e-125 |
| AAG32922 HMG-CoA synthase [Brassica juncea] | 1163 | 2e-125 |
| XP_002874726 hydroxymethylglutaryl-CoA synthase [Arabidopsis lyrata subsp. lyrata] | 1162 | 3e-125 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P54873 Hydroxymethylglutaryl-CoA synthase | 1154 | 1e-125 |
| Q5R7Z9 Hydroxymethylglutaryl-CoA synthase, cytoplasmic | 779 | 4e-082 |
| Q01581 Hydroxymethylglutaryl-CoA synthase, cytoplasmic | 773 | 2e-081 |
| P23228 Hydroxymethylglutaryl-CoA synthase, cytoplasmic | 764 | 2e-080 |
| Q8JZK9 Hydroxymethylglutaryl-CoA synthase, cytoplasmic | 763 | 3e-080 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FVG1 HMG-CoA synthase | 1169 | 3e-126 |
| Q9M6U3 HMG-CoA synthase | 1169 | 3e-126 |
| Q9FVG2 HMG-CoA synthase | 1163 | 2e-125 |
| Q9FVG0 HMG-CoA synthase | 1152 | 3e-124 |
| A9PBS1 Putative uncharacterized protein | 1092 | 3e-117 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G11820.2 MVA1; acetyl-CoA C-acetyltransferase/ hydroxymethylglutaryl-CoA synthase | 1154 | 1e-126 |
| AT4G11820.1 MVA1; acetyl-CoA C-acetyltransferase/ hydroxymethylglutaryl-CoA synthase | 879 | 9e-095 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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