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Information for unigene UN00734

FASTA Sequence
Unigene ID: UN00734Length: 1361 SSR 
GTGACAATCTCATAAGTGAAGTTGCTGCCAACAATTTTGATGTAGCTGTTGGGGATGTTGCTATAGTTACAAACAGAACCAAGTTT
GTAGATTTCACGCAGCCATTTATGGAATCAGGGCTTGTGGTGGTAGCTCCAGTGAAGGGGGCCAAGTCTAGTCCATGGTCTTTCTT
GAAGCCATTCACTGTAGAGATGTGGGCTGTGACCGGAGCTTTCTTTCTCTTTGTTGGAGCCATCATTTGGATTCTTGAACACCGCT
TTAATGAAGAATTTCGTGGACCTCCTAGGCGTCAAATCATCACCGCTTTCTGGTTTAGCTTCTCAACGATGTTCTTCTCTCTGAGG
GAGAACACGGTGAGTACGCTGGGGAGGTTTGTGCTACTCATATGGTTATTTGTGGTTCTGATCATCAACTCAAGCTACACGGCCAG
TCTCACTTCGATCCTCACCGTTCAACAGCTAACATCTCGGATAGAAGGAATGGACAGTCTAATAGCAAGCAACGAACCCATTGGAG
TGCAAGACGGTGCGTTTGCGTATAAATACCTGGTCAATGAACTTAACATACCTCCATCAAGAATCATTCCGCTGAAAGACGAAGAA
GAATATCTCTCTGCTCTCCAACTTGGTCCCAGAGCCGGTGGCGTGGCAGCCATAGTCGACGAGCCTCCTTATATCAAAGCTCTGTT
GTCAAACAGCAACTGCAAGTTCCGTACTGTTGGACCGGAATTCACTCGGACAGGCTGGGGATTTGCCTTCCAGAGAGACTCTCCTC
TAGCAGTGGACATGTCAACAGCGATCCTGCAGCTGTCTGAAGAAGGAAAACTGGAGAATATCCGCAAGAAGTGGCTTACCTACAGC
CACGAATGCTCAATGCAGATTGCAGACACAGAGAACTATCAAATCTCGGTACAGAGTTTCTGGGGGCTGTTCCTAATCTGTGGCAT
CGTTTGGTTCATTGTACTCACCCTTTTCGGCTGGAAAGTTTTCTGGCAATGCCAACGGTTAAGAACAGAAGAAGAGAGTGATGAAG
TAAGAGCTAGCGAAGAAGCCAGTTCTTCTAGATCAGGGAGAAGTTTGAGGGCGGCGAGTTTCAAGGATTTGATCAAAGTTGTGGAT
AAGAGAGAAGCAGAGATCAAGGAGATTCTTAAGCAGAAGAGCAGTAAGAAACTCAAAACTAGCCAAAGCTCAGCTGAAACTCCATA
GAGAGAGTTTATATATATATAGATCATGAAGAGAGTCAACACAATTTGTTCAAGTGACTACAAACATTACGTTACTTACAAAAGGT
AAATAGATTTATTCATAAGATTCTGTGATGGTACCATAACCCAAAGAAAGTGAATGCGTTTATTCTGCTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881224 glutamate receptor 3.5 precursor [Arabidopsis lyrata subsp. lyrata]18213e-201
Q9SW97 RecName: Full=Glutamate receptor 3.5; AltName: Full=Ionotropic glutamate receptor GLR6; AltName: Full=Ligand-gated ion channel 3.5; Flags: Precursor18186e-201
NP_565743 glutamate receptor 3.5 [Arabidopsis thaliana]18186e-201
NP_001031464 glutamate receptor 3.5 [Arabidopsis thaliana]18186e-201
AAR88100 putative glutamate receptor ion channel [Arabidopsis thaliana]18132e-200

Swiss-Prot top hits (Blast detail)Scoree value
Q9SW97 Glutamate receptor 3.518183e-202
Q8GXJ4 Glutamate receptor 3.416704e-185
Q9C8E7 Glutamate receptor 3.310782e-116
Q7XP59 Glutamate receptor 3.110503e-113
Q7XJL2 Glutamate receptor 3.110271e-110

TrEMBL top hits (Blast detail)Scoree value
Q6RKN4 Putative glutamate receptor ion channel18132e-200
Q53YX3 GLUR316706e-184
B9SDW0 Glutamate receptor 3 plant, putative13831e-150
B9IAE8 Glutamate-gated kainate-type ion channel receptor subunit GluR513776e-150
B9GU66 Glutamate-gated kainate-type ion channel receptor subunit GluR512745e-138

Arabidopsis top hits (Blast detail)Scoree value
AT2G32390.1 ATGLR3.5 (GLUTAMATE RECEPTOR 3.5); intracellular ligand-gated ion channel18182e-203
AT2G32390.2 ATGLR3.5 (GLUTAMATE RECEPTOR 3.5); intracellular ligand-gated ion channel18182e-203
AT1G05200.1 ATGLR3.4; intracellular ligand-gated ion channel16703e-186
AT1G05200.2 ATGLR3.4; intracellular ligand-gated ion channel16703e-186
AT1G42540.1 ATGLR3.3; intracellular ligand-gated ion channel10781e-117

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information