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Information for unigene UN00738
| FASTA Sequence |
| Unigene ID: UN00738 | Length: 880 |
SSR | | GGGGTGCTCGTCGTCGTCGTCGAAAGAGAGAGAGAGAGAGGAGAGAGACGAGAAAATAGTGGGAGAAGTGGCGGAGAGCTGTGTAG
ACACTATGTTGATGGAGATAGTGGCGATGTACAGCGGCCGATTCTACGCCAACAAGCGGGAACTCGCCGCTCGGAGGATCGAGGCC
ATCGGTTATCAGGTACACTATGGAAAGACCAAGGTTCAGCGACCACCTAGAGGCAATCAAGTTTATCTGTAAAGACTTCTGGTCTG
AGGTTTTCAAGAAGCAGATTGATAATCTCAAGACTAATCACCGGGGTACTTTTGTATTGCAAGACAACAAGTTCAGATGGCTATCT
CGTGTCTCAATTGACCCTTCGTCTGAGAAGGAAACCGAAGATCCGTCTACTCCAGGGGAAAGCAAAGCAGCACAAGCGGTGAGCAT
GTACCTGTATTTCCCATGTGGAATCATAAGAGGTGTCCTCTCCAACTTGGGGATACCTTGTGCTGTCTCTGCAGACATATCCAGCC
TTCCCACTTGCTCCTTCGTGATTCGGGTCAAGGCTTGATTCTGGCATTAGCTTGGGAGTCCTCTCATTTACAGATTCCAGCTCGGC
TTTATGGTTTCAACTTTCAAGGACGATAAAGAGTCTTTGAGTCCTAAGAGATTCAACTAAAAGCCCTTCTCAAGGCTTCTGTTTGC
TGCGGCTTCTTCCAATTCTCACAACTTTGAATTCCCTTCCCTGTAAAACAATATTTGAATGCCTAGTGGGCCTATCTCGTCCTAAA
AAGCCTGTTAAGTAAGCTTTGCCATTCTTAGTCATGACTTTGAATTCCGACTTTGGTATAGTTTTTGTCTTTTATCGAGTTGCTGC
AAGTGTGAAATTCTTTTAGC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002884484 predicted protein [Arabidopsis lyrata subsp. lyrata] | 642 | 7e-065 |
| NP_187151 Transport protein particle (TRAPP) component [Arabidopsis thaliana] | 639 | 2e-064 |
| XP_002512289 trafficking protein particle complex subunit 6b, putative [Ricinus communis] | 557 | 5e-055 |
| XP_002269746 PREDICTED: hypothetical protein [Vitis vinifera] | 552 | 2e-054 |
| AEC10988 trafficking protein [Camellia sinensis] | 547 | 7e-054 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q32L78 Trafficking protein particle complex subunit 6B | 212 | 2e-016 |
| Q86SZ2 Trafficking protein particle complex subunit 6B | 212 | 2e-016 |
| Q9D289 Trafficking protein particle complex subunit 6B | 209 | 5e-016 |
| Q78XR0 Trafficking protein particle complex subunit 6A | 169 | 2e-011 |
| Q3T086 Trafficking protein particle complex subunit 6A | 160 | 2e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9CAW4 Putative uncharacterized protein At3g05000 | 639 | 1e-064 |
| B9REX0 Trafficking protein particle complex subunit 6b, putative | 557 | 3e-055 |
| A5AGD5 Putative uncharacterized protein | 552 | 1e-054 |
| A9PBG7 Predicted protein | 552 | 1e-054 |
| A2Q3F3 Putative uncharacterized protein | 543 | 1e-053 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G05000.1 transport protein particle (TRAPP) component Bet3 family protein | 640 | 5e-067 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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