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Information for unigene UN00762
| FASTA Sequence |
| Unigene ID: UN00762 | Length: 1294 |
| SNP | GGATACTTTCTTCAAACTCTCTTTTGCTCTCTATCTCTGTCATGGCGGCTTCTTCTTCCTTGCCTCACTTTGTCTTCCCGAGCTTC
CATGGGCCAGATGTTCGTAAAGGAATCCTTAGTCATTTACACAATGTCTTTGCGAGGAAAAAAATCACCATGTTCAATGATCAGGA
GATGGAGAGATGCCAGCCGATTGGATCCACACTCATACAAGCCATTAGAGAAGCAAAAGCTTCCATCGTTTTGATCTCGAAGAATT
ATGCTTCTTCGAGATGTTGTTTAGATGAACTGCTTGAAATCTTGAACTGCCAAGAAGCTTCAGGGCAGATTGTGATGCCGGTTTTC
TACGACGTTGAGCCGTCGGATGTAAAGAAACAGAAGGGAGACTTCGGGATCATATTTAAGACAACCTGTGATGGTGCATCAGAGGA
AAAGAAGCGGAGATGGATCGAAGCTTTGACATGTGTAGCAACCATAACTGGAGAACACTCTCTTAAGTGTCATGATGATGCTGAGA
TGCTCGAAAAGATTTCCACAGTTATGTTGAACAAACTGAAAATGGAAAAGCTCAAGGAAGAGTTTGGGATTCACGATGTAGACCAG
AATGGTTTCATAACTAAAGAAGAGCTTCAATATGTGATAGCAAAAAGTGGGGTCAAAGTAACTGATAGACAAGTTCGTAAGACCAT
CAAGGCAGCTGATGCTGATCATGATGGTCGGATCAGCTATGATGAGTTCGTCAAATTCATGGAAAAGGTTGATATAGAAAATGTGC
CATGGTGGGAAAGTTCGCACTGTCATGGAAGGAAAATAAAGAAAATTTTCAACAAACTGGCAGGCTATTGGATGTAAACCAGAATG
GTTTCTTAAGCTGCAGAAGACTATCAAAAATATAAGTTGAAAATTATTTAATAGAATATAATTTCGCAAAAAAAATTGAAAATTAT
TGGGCAAAAAGAAACCGATGAGGATGCTCGTAATTTCATCAAAACATTTGATGTTGATTGTGATGCGTGGTTAGGTCAGCTATGAT
GAATTCGTCAAACTGACGAGGTGATGCCGTGCATTCTTATCTAGTTGGCAGGTTACATTGTGGGTGTTTGATATGTTCTTCAAGTC
TTAAATTGGTTTTCTATTTTTCTTTTTATCCTAAAAAGTGTTATTTCTTTTTCTTTTGTTAGAGTTTTTCTATAGCTTTAAGTGAT
GTTAGAAGTTATAAAAGAAAGAAACCATGAATCCTTGTTTGCACTTTTTTAAAAAAAAACTAATAGAAACCCAAAGGAAAATTAAA
TTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880958 predicted protein [Arabidopsis lyrata subsp. lyrata] | 551 | 5e-054 |
| XP_002870666 predicted protein [Arabidopsis lyrata subsp. lyrata] | 544 | 3e-053 |
| XP_002870667 predicted protein [Arabidopsis lyrata subsp. lyrata] | 534 | 4e-052 |
| NP_198970 TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 528 | 2e-051 |
| NP_198990 TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] | 527 | 3e-051 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82500 Putative disease resistance protein At4g11170 | 404 | 2e-038 |
| Q40392 TMV resistance protein N | 257 | 2e-021 |
| O23320 Calmodulin-like protein 8 | 184 | 7e-013 |
| Q0JNL7 Calmodulin-3 | 182 | 1e-012 |
| Q7DMP0 Calmodulin-2/4 (Fragment) | 180 | 2e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FFS5 Disease resistance protein-like | 528 | 1e-051 |
| Q9LSX5 Disease resistance protein-like | 527 | 2e-051 |
| Q8GUQ4 TIR-NBS-LRR | 525 | 3e-051 |
| Q9FKR7 Disease resistance protein-like | 518 | 2e-050 |
| Q9FGW1 Disease resistance protein-like | 509 | 2e-049 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G41550.1 disease resistance protein (TIR-NBS-LRR class), putative | 528 | 8e-054 |
| AT5G41750.1 disease resistance protein (TIR-NBS-LRR class), putative | 527 | 1e-053 |
| AT5G41750.2 disease resistance protein (TIR-NBS-LRR class), putative | 527 | 1e-053 |
| AT5G40910.1 disease resistance protein (TIR-NBS-LRR class), putative | 518 | 1e-052 |
| AT1G66090.1 disease resistance protein (TIR-NBS class), putative | 485 | 8e-049 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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