Information for unigene UN00770
| FASTA Sequence |
| Unigene ID: UN00770 | Length: 1112 |
SSR | | GTGGTTAAAAGCATGCTTCGAAAGAATCCAGAACTCAGACCAAGTGCTGCTGAGCTTCTCAGACAGCCGTTACTTCAGCCATATAT
CCAGAAGATTCATCTGAAAGTGAACGATCCAGTTAACAATGTGTTGCCTGCGGAATGGCCAGAATCTGAATCCGCCAGGAGATGCA
GCTTCCCTGAGCAGAGAAGGCGTCGTGCAGTCAAAAGCAAGAGCTTTGGTCCAAGCAGGTTTAGGGGTAACCAGGAAGATTCTGTT
TCTTCGATTAAAAAACCTGTGCCTGCATATCTGTCTACAGATGAAAGTGATGATGGAACGGTTGTTCGTAGAACCACAGAAGCTTC
TAAAAGTACTAAGTATGTTCCAGTGAGAGCTTCGGCCTCACCTGTGCGATCAAGACAGCCTAAGAGTGACCGTGGTCAACTTCCTG
TTTCATCACAGCATACCAACCGAAAATCAGCAGCTTTGATTCGTAGAGCATCCATGCCAAGCTCAAGAAAGCCTGTAAAAGAAATC
AAAGACTCTCTGTACAACTCGAAAACCAGTATTCTCCACCAGATAAAATCTCCTGACGTGTCAATGAACGCACCAAGAATCGACAA
GATTGAGTTTCCACTGGCGTCATACGAGGAAGAACCGTTTGTTCCGGTTGTGCGTGGGAAGAAGAAGAAGAAAGCATCGTTTAGAG
GTTCATACAGCCCACCTCCAGAGCCACCACTAGACTGCTCAGTCACAAAAGACAAATTCGCGCTTGAACCAGGGCAAAACGTAGAA
GTGGCGTTTATGAAGGCGGTGTATCAGTATGAAGAAGCATACCCTGAAAACAAGAGCGAGTCATCCGATCATAATGCAACTGCAGG
AGCGTCAAGCAGGGCTTCGTTTGGTATAAGAAGACAAAGATTTGATCCTAGTTTTTATCAGCAACGAGCTGAGGCACTGGAGGGAT
TGCTCGAGTTCAGTGCGAGATTGCTTCAAGGTGAGAGGTACGATGAGCTTAACGTCTTACTGAGACCATTTGGTCCAGGGAAAGTT
TCACCCAGAGAGACAGCCATTTGGTTGTCCAAGAGCTTCAAGGAAACTACTAAGCTGGAAGATTGAGAAACTGTTCATTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882375 hypothetical protein ARALYDRAFT_477750 [Arabidopsis lyrata subsp. lyrata] | 1555 | 1e-170 |
| NP_187132 serine/threonine-protein kinase Nek2 [Arabidopsis thaliana] | 1552 | 3e-170 |
| BAH20068 AT3G04810 [Arabidopsis thaliana] | 1544 | 3e-169 |
| BAH20158 AT3G04810 [Arabidopsis thaliana] | 1544 | 3e-169 |
| AAK43977 putative kinase [Arabidopsis thaliana] | 907 | 2e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9CAU7 Serine/threonine-protein kinase Nek2 | 1552 | 1e-171 |
| Q8RX66 Serine/threonine-protein kinase Nek3 | 998 | 2e-107 |
| Q9SLI2 Serine/threonine-protein kinase Nek1 | 598 | 6e-061 |
| Q10GB1 Serine/threonine-protein kinase Nek1 | 450 | 8e-044 |
| A2ZMH2 Serine/threonine-protein kinase Nek2 | 306 | 4e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DH51 AT3G04810 protein | 1544 | 2e-169 |
| B9DHE1 AT3G04810 protein | 1544 | 2e-169 |
| B9REQ9 ATP binding protein, putative | 677 | 6e-069 |
| Q947T1 LSTK-1-like kinase | 561 | 2e-055 |
| Q8SA64 NIMA-related protein kinase | 544 | 2e-053 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G04810.1 ATNEK2 (NIMA-RELATED KINASE 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 1553 | 9e-173 |
| AT3G04810.2 ATNEK2 (NIMA-RELATED KINASE 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 1553 | 9e-173 |
| AT5G28290.1 ATNEK3 (NIMA-RELATED KINASE3); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 998 | 2e-108 |
| AT1G54510.1 ATNEK1 (ARABIDOPSIS THALIANA NIMA-RELATED SERINE/THREONINE KINASE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 598 | 5e-062 |
| AT3G63280.1 ATNEK4 (NIMA-RELATED KINASE 4); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 261 | 6e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
| Software error:
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