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Information for unigene UN00813
| FASTA Sequence |
| Unigene ID: UN00813 | Length: 1192 |
SSR | | GGATGAACTTTCAAGTGAAGTGAACAACAAAACGACGACAAAAAAAAAAACACTCTCAGTCTCTGTAAACCCTAAACGACCCTAAA
CCCAATTCGTGCTTTTCCGATGGCGAGCCTTCGATGCCTTCGCGAGCTACGCCGCCGCGCCACGACGGTCCTCTCGATCAACCAGA
CGCGATTGATCTCTTCACATCCGAGCTTAGAGCCTTTTTGTACCATCATTTCTCATGCGACCCCTATTCCGAATCGATCTCTCACT
AGAGATCTCCCATGGTACACTCGCTCCCAAGGCCGCCATTTCTCTTCAAAAACAAACGATACTGATGATAGCAGCGAAGGAGAAGA
TGATGATGATGATGATGATGATGATGATGATTACGAGGATTCGGCGGAGATGGAAGTAGAAAGGGAATATTCACCGGCGGAGAAAG
TGGAAGCAGCGGCGGAGATAGGGTACAAGGTGATGGGTCCTCTCAAACCTTCGGAGAGACTATTCAAACCCTATGAGCCAGTGTTC
GCCGTTGTTCAGATTGGTTCGCATCAGTTCAAAGTAAGCAACGGAGACTCTATTTTCACGGAGAAGTTGAAGTTCTGTGACATCAA
TGATAAGTTGGTACTGGCTAAGGTGCTTCTACTGGGCTCCGCAAGCCAGACGATTATTGGCAGGCCTATCTTGCCTGATGCTACTG
TTCATGCTGTTGTGGAAGAGCATGCATTGGATGAAAAAGTGCTCATTTTCAAAAAGAAACGAAGGAAGAATTATAGGAGAACCACA
GGACATCGACAGGAATTGACAAAGTTGAGAATAACCGATATACAAGGAATTGAGAAACCAGAGCCGACGATTGTCCATAAGCCTTC
CAAGCCAGCTGATACAGAGCAACCAGAGGCTGAGCTAGTTGGTTAGAGAGAAGAATCGCTTCTTTTTTTCTTTTGTTGCCGATGCC
AATACTTCGAAGTAAGTTCATCAAACAGTTGCCGATTTGGGCTTCACCTTTTCTGAAGTTTTTTTACAACTAGTAGCTGAAAAGGC
TTTCTTTGTAGTTAATGGCAATGTTGATACTAAGATATGAACTTGAGTACCTTTAGCTATATAGTTCATCCTCTTATGTTTGATTT
TGATCTTCATTTGTACTGGAACTGGCCCACGCACTGTTTGTTTTTGTCTCGAAATTCACAAATAAAAGTTTGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867320 hypothetical protein ARALYDRAFT_328625 [Arabidopsis lyrata subsp. lyrata] | 1105 | 2e-118 |
| NP_567861 50S ribosomal protein L21 [Arabidopsis thaliana] | 1089 | 2e-116 |
| CAA18200 putative protein [Arabidopsis thaliana] | 1008 | 4e-107 |
| XP_002519068 50S ribosomal protein L21, mitochondrial precursor, putative [Ricinus communis] | 692 | 2e-070 |
| ADN33989 50S ribosomal protein l21 mitochondrial precursor [Cucumis melo subsp. melo] | 691 | 2e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L9A0 50S ribosomal protein L21, mitochondrial | 1089 | 7e-118 |
| P24613 50S ribosomal protein L21, chloroplastic | 317 | 2e-028 |
| P51412 50S ribosomal protein L21, chloroplastic | 281 | 4e-024 |
| Q54IF0 Probable 39S ribosomal protein L21, mitochondrial | 236 | 6e-019 |
| B6IR01 50S ribosomal protein L21 | 233 | 1e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WRT4 50S ribosomal protein L21 | 1089 | 1e-116 |
| B9RZ99 50S ribosomal protein L21 | 692 | 1e-070 |
| B6TJJ8 50S ribosomal protein L21 | 647 | 2e-065 |
| B4FI28 50S ribosomal protein L21 | 644 | 5e-065 |
| C5YVG2 50S ribosomal protein L21 | 641 | 1e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G30930.1 NFD1 (NUCLEAR FUSION DEFECTIVE 1); RNA binding / structural constituent of ribosome | 1090 | 5e-119 |
| AT1G35680.1 50S ribosomal protein L21, chloroplast / CL21 (RPL21) | 281 | 3e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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