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Information for unigene UN00814
| FASTA Sequence |
| Unigene ID: UN00814 | Length: 1400 |
SSR | | GGGGGGATGCTAGTGACCTTTTGTCTTTTCTTCAATTCTCTCTCTCTCTCTCTCCTTTCATTCTGGTTCCAACAATATGTATGCAA
TGAAAGAAGAAGACTGTCTTCAAACGTTTCACAACTTACAAGACTATCAAGACCCGTTTCTTCTTCAACACCGTCCACAAATCCTG
CCTTGGTCATCTCTACCTTCATTTGACCCGAGCTATTTCCCATCCAACCAGACCCGTCATCCTGATCCTGTCCCCTATTTCAATAG
AAGAGCTTCTTCGTCCTCTTTTTTTGACTATACCGATGGTTTCGTCTCTCCTCCTTCCATGGATCGTCATCATCCCAATCATCTAA
GGGTTTTATCGGAGGCTCTTGGACCCATCATGCGACGTGGCTCATCCTTCGGGTTTGAAGATGAGATTATGGGAAAACTGAGTGCA
CAAGAAGTCATGGATGCTAAGGCACTGGCTGCTTCGAAGAGTCATAGTGAAGCTGAGAGAAGAAGACGAGAGAGAATCAACACTCA
TCTAGCTAACTTGCGAAGTATTTTACCAAATACAACCAAAACGGACAAAGCTTCGCTGCTAGCGGAAGTGATCCAACACATGAAGG
AGTTAAAACGACAGACATCACTGATCACAGACACCAGTCAACTCCCAACAGAGTGCGATGATCTGACCGTTGACTCTACTTACAAC
GACGAAGAAGGAAACTTGATGATAAGAGTTTCCTTTTGCTGCGAAGACAGGACTGAACTCATGCATGACATTATCACTGCCTTAAA
GTCTCTTCATCTCCGAACTCTCAAAGCCGAGATCGCAACCGTAGGTGGTCGAATCAAGAACGTCTTGTTCTTGAGCCGAGAAGACG
ATGATGAATATTGTAGAAACTTCGATGGTATTGACGTGGATAATGATGATGAAGAGAAGAGATGTAATCGCGTGAGTTCTATAGAA
GAAGCGTTAAAAGCGGTTATAGAGAAATGTGTCAAAAACGATGATGATAACAATAACTTGGATAAATCATTTTCAGGGAGTACTAA
GAGGCAAAGGACTAGCAAGATGGTAAACCGAGGTTATAATTAGTTAATCCTCCCACAATATTATTGTTTAGATCATCGTCTTTAAT
TAATGTGTTAATTAGACTTGCAAATTGGGATTATGTGATAATTAGTATTTTTGGAGGGAGGGGGGGGGGGGGGATCGCTAGTCCTT
TTTAATTGTATTTGGGTTTCTTCTTTTATGTTTTTAATCTATGAAGGACCCTTTATCTAGGGTTTAATAGTGATGGGTTTGGTTTA
TATATGTATTATCATCAATATATTTTTCTCGTCTTGATTAATATATGAAATGTAAAGAGGTTGGGTTTGTATTACTTGATGGAGTG
GAATCAAGAACCTTTCTTAATTAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189199 transcription factor AIG1 [Arabidopsis thaliana] | 1376 | 1e-149 |
| XP_002875272 hypothetical protein ARALYDRAFT_484332 [Arabidopsis lyrata subsp. lyrata] | 1333 | 1e-144 |
| XP_002278697 PREDICTED: hypothetical protein [Vitis vinifera] | 733 | 4e-075 |
| CBI27073 unnamed protein product [Vitis vinifera] | 705 | 7e-072 |
| XP_002315961 predicted protein [Populus trichocarpa] | 677 | 1e-068 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LS08 Transcription factor AIG1 | 1376 | 5e-151 |
| Q9S7Y1 Transcription factor bHLH30 | 647 | 2e-066 |
| O80674 Transcription factor bHLH106 | 339 | 8e-031 |
| Q9LET0 Putative transcription factor bHLH107 | 336 | 2e-030 |
| Q9XEF0 Transcription factor bHLH51 | 297 | 6e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HWM2 Predicted protein | 677 | 9e-069 |
| C0JP31 Putative basic helix-loop-helix protein BHLH25 | 677 | 9e-069 |
| B9HIY4 Predicted protein | 669 | 7e-068 |
| C6TE65 Putative uncharacterized protein | 627 | 5e-063 |
| B9SEI3 DNA binding protein, putative | 605 | 2e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G25710.1 BHLH32 (BASIC HELIX-LOOP-HELIX 32); DNA binding / transcription factor | 1377 | 3e-152 |
| AT1G68810.1 basic helix-loop-helix (bHLH) family protein | 647 | 1e-067 |
| AT2G41130.1 basic helix-loop-helix (bHLH) family protein | 339 | 7e-032 |
| AT3G56770.1 basic helix-loop-helix (bHLH) family protein | 336 | 2e-031 |
| AT2G40200.1 basic helix-loop-helix (bHLH) family protein | 297 | 5e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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