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Information for unigene UN00819
| FASTA Sequence |
| Unigene ID: UN00819 | Length: 1290 |
SSR | | GGACGCATAACTTCTCCATCACTCACCGGATAACCTCCGTCGTCTTCCGCCGCAGCTTCTAACTCCATGGCCGGCGTAAACCTACA
GCTCCGTCACTCGTACTCTATCGCTCAATTCCTCCCAAATGTTTCTTCTCCTTCTCCTCCTCCTCCTCAGCGAGTTCGGCTCGGAA
TCTCACCCTCTCGTGTTCTCTTCTCTAACCTCCGAGCCAATTCTCCAACCTTACGAACCACTCGCCGCTCTGACACTATCGCTTCG
TCTTCCGTATCTTCCGCCGTCGATTCTGATTCGTTGGTGGGAGACGGCGGTGAAGTGGGGAGGATCCCTTTGCTGGAGGTTAAGGA
TTTGAGAGCTGTGATTGTTGAAACGAGGCAGGAGATACTTAAAGGCGTCAACTTGGTTGTCTACGAAGGCGAGGTTCACGCAGTGA
TGGGGAAGAATGGTTCAGGGAAGAGCACATTCTCTAAGGTTCTTGTTGGTCATCCGGATTACGAAGTTACGGGAGGGAGTATTGAA
TTTAAAGGGCAGAATCTGGTTGATATGGAACCGGAGGAGAGATCTCTTGCTGGTCTCTTCATGAGTTTCCAGTCCCCTGTTGAGAT
CCCTGGTGTTAGCAATATGGATTTCTTGAATATGGCTTTCAATGCTCGGAAACGAAAACTCGGTCAGCCTGAGCTTGATCCAATCC
AGTTTTACAGCCACTCAGTATCAAAGCTTGAAGTTGTGAACATGAAGACCGATTTTCTGAACAGGAATGTTAATGAAGGATTTAGT
GGTGGTGAAAGGAAACGCAACGAGATTCTACAGTTAGCGGTACTTGGAGCAGAGCTGGCTATACTGGACGAGATTGATTCAGGGTT
GGATGTTGATGCTCTTCAAGATGTGGCAAAGGCGGCGAATGGTCTTTTGACACCAAAAAACTCTGTGCTGATGATAACCCACTACC
AACGCCTACTTGACTACATTAAACCAACTCTCATTCACATCATGGAGAATGGAAGAATCATTAAAACCGGATACAACTCCTTGGCA
AAATTACTGGAAAAGGAAGGCTACAAGGCCATATCCGGTTAGTTATCTCAGATTCATAGTAAACGGCTCTTCCTTCTTCTGAGAGA
CCAGACTGTTGTTTCATGTCTCAAAAGACATTGGAATCTGAAGATGATGTCTGAAAAGTCAATTTTTTTTGCTTCAGTGTTTTGAT
ACTTTTTTTTGTAACTAACAATAAATTCAGTTAAATAACGTCATTTATGTTCAAGTGGGGTACTAGAAAATAAAAATGTTCAGACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187678 ABC transporter I family member 6 [Arabidopsis thaliana] | 1515 | 8e-166 |
| AAM61568 putative ABC transporter ATPase [Arabidopsis thaliana] | 1509 | 4e-165 |
| XP_002884806 ATNAP7 [Arabidopsis lyrata subsp. lyrata] | 1493 | 3e-163 |
| XP_002310964 white-brown-complex ABC transporter family [Populus trichocarpa] | 1115 | 2e-119 |
| AAF19582 putative ABC transporter [Arabidopsis thaliana] | 1109 | 9e-119 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9CAF5 ABC transporter I family member 6, chloroplastic | 1515 | 3e-167 |
| P48255 Probable ATP-dependent transporter ycf16 | 785 | 1e-082 |
| Q00830 Probable ATP-dependent transporter ycf16 | 748 | 3e-078 |
| Q1XDP6 Probable ATP-dependent transporter ycf16 | 735 | 9e-077 |
| O78474 Probable ATP-dependent transporter ycf16 | 732 | 2e-076 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HKI2 White-brown-complex ABC transporter family | 1115 | 1e-119 |
| B9SCB8 Abc transporter, putative | 1076 | 4e-115 |
| A9P088 Putative uncharacterized protein | 948 | 3e-100 |
| Q2PER0 Putative ABC transporter like ATPase (Fragment) | 933 | 2e-098 |
| A5BIF7 Putative uncharacterized protein | 909 | 1e-095 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G10670.1 ATNAP7; ATPase, coupled to transmembrane movement of substances / protein binding / transporter | 1516 | 2e-168 |
| AT1G15210.1 PDR7 (PLEIOTROPIC DRUG RESISTANCE 7); ATPase, coupled to transmembrane movement of substances | 150 | 5e-010 |
| AT5G60740.1 ATPase, coupled to transmembrane movement of substances | 142 | 5e-009 |
| AT3G25620.1 ABC transporter family protein | 134 | 4e-008 |
| AT1G71960.1 ABC transporter family protein | 123 | 7e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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