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Information for unigene UN00833
| FASTA Sequence |
| Unigene ID: UN00833 | Length: 1721 |
SSR | | GGATATCCATTAATGGTCATCTCTCTCTCTGTCTCACTGTTTATGTTTGTTCTTTCTCTCCCTCCATCATCGAGAGTTTTACTAAA
AACTTAGTGGGGTTCTCTGGAAAATATTCGAATTTTTTGAAAAGATTTTTGAGTGATGATGACACTTAACTCACTCTCTCCGGCTG
AATCCATCTCTCTTTCTTTCTTGGATACTTCCAGGTTCAACCAAACCCCCAAACTTCTAGGTGGGTTTAGTTTGAGGAAGAAGAGG
AATCAAGGTAGAGGTTTTGTTGGAAAAGGAGTCAAATGTTCAGTTAAAGCACAGCAGCAGCAGCAGCAGCAACCTCCTCCAGCGTG
GCCTGGGAGAGCTGTTCCCGAGCCTCCTCGTCAATCTTGGGATGGACCTAAACCCATCTCCATCGTCGGTTCTACTGGTTCTATTG
GCACCCAGACCTTGGATATTGTGGCTGAGAATCCTGACAAATTTAGAGTCGTGGCTCTAGCTGCTGGCTCCAATGTTACCCTCCTT
GCTGATCAGGTGAAGAGATTTAAACCTGCACTGGTTGCTGTTAGAAATGAGTCATTGGTCAATGAGCTTAAAGAGGCTTTAGCCGG
TTTGGACTATAAACCTGAGATCATTCCTGGGGAGCAAGGTGTGGTTGAGGTTGCTTGTCACCCTGACGCTGTAACTGTTGTTACAG
GGATTGTAGGTTGCGCAGGACTTAAGCCTACGGTCGCTGCAATTGAAGCGGGAAAGGACATTGCTCTTGCAGACAAAGAGACATTA
ATAGCAGGTGGTCCCTTCGTCCTTCCACTTGCCAACAAACATAACGTTAAGATTCTTCCTGCTGATTCAGAACATTCAGCTATATT
TCAGTGTATTCAAGGTTTGCCTGAAGGCGCTCTGCGCAAGATAATCTTGACTGCATCTGGTGGAGCTTTTAGAGACTGGCCTGTTG
AAAAGCTCAAGGAAGTTAAAGTAGCAGATGCTTTGAAGCATCCTAACTGGAACATGGGAAAGAAAATCACAGTCGACTCAGCTACG
CTTTTCAACAAGGGCCTTGAGGTCATTGAAGCTCATTACTTGTTTGGAGCTGAGTATGACGGTATAGAGATTGTCATTCACCCACA
AAGTATCATACACTCCATGATTGAAACACAGGATTCATCTGTGCTTGCTCAACTGGGATGGCCTGATATGCGTTTACCTATTCTCT
ACACCATGTCATGGCCTGATAGGGTTCCTTGTTCCGAAGTAACGTGGCCAAGACTTGACCTTTGCAAACTCGGTTCGTTGACTTTC
AAGAAACCAGACAATGTGAAATACCCATCAATGGATTTCGCTTATGCTGCGGGACGAGCTGGAGGTACTATGACTGGTGTTTTCAG
TGCTGCTAACGAGAAAGCTGTTGAAATGTTCATTGATGAAAAGATAAGCTATTTGGATATTTTCAAGGTGGGGGAGTTAACATGCG
ATAAACCTCGAAGGGAGTTGGTAACATCCCCGTCGCTTGAAGAGATTGTTCACTATGTTTTGTGGGGGGGGGAATACGCTGCCAAT
TTACAGCTTTTTTTTGGTGGGAGGCCAGTTCCTGCCTGATGATTAAGTAACTTGTTGTTGGGGGGAAGTGAATAATAAAGAAATGA
TGGAAAGAAGATTAGTGCAGTGAGTGGGTTATTTTGACACCGGTTTTGGAAAGGATTACATTTTAAGTTGTACCTAAATTGTCTGT
G
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_201085 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Arabidopsis thaliana] | 2241 | 7e-250 |
| XP_002866510 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Arabidopsis lyrata subsp. lyrata] | 2220 | 2e-247 |
| XP_002511399 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative [Ricinus communis] | 1987 | 2e-220 |
| XP_002282761 PREDICTED: hypothetical protein [Vitis vinifera] | 1985 | 4e-220 |
| ABO38177 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Croton stellatopilosus] | 1981 | 1e-219 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XFS9 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic | 2241 | 3e-251 |
| Q8W250 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic | 1954 | 6e-218 |
| Q9XES0 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic | 1905 | 3e-212 |
| B1WNP5 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 1335 | 3e-146 |
| B0CD21 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 1330 | 1e-145 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RB24 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast, putative | 1987 | 1e-220 |
| A4L795 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 1981 | 7e-220 |
| Q0GYS3 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 1971 | 1e-218 |
| Q947C3 1-deoxy-D-xylulose-5-phosphate reductoisomerase | 1966 | 4e-218 |
| B9I3A1 Predicted protein | 1960 | 2e-217 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G62790.1 DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE); 1-deoxy-D-xylulose-5-phosphate reductoisomerase | 2261 | 1e-254 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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