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Information for unigene UN00836

FASTA Sequence
Unigene ID: UN00836Length: 621 SSR 
GGAAGACATCTCATTTAAAACCAATCTTTCTTCTTCTTCTTCGTCTTCCTCTTTTCCTTATCTCTCCATCTCTGTGGAGAGACAAA
GGAACATTCTTGAAGTCTTTCTTGCACAATGCTAACTCATTAGCTGATTCAAGCTCAAATCTTTCTTCAAAGCTAAACGTGTTTCT
TGTTCTTCTTCTGATAATAATGCCGTCAAACGCCGTCGTTTTAGCGGCGGTCTTGTGCTTGTTCCTTCTACCACCGTTCGCCGTCG
GGATACGGACGGGTCCGGGGAGGATCACGACCGTCAGCGGCGGAAGAAACGCGTTTAGTAAACTCGGTCCGTTCATGGAAGCTCCG
GAATATAGAAACGGCAAGGAGTGCGCGTCTTCACCTACAAACAGAGAGAACTTCGTGTCGTCTTCTTCTTCTTCTTCCAACGATCC
CTCTCTAGTCCACATCGCGATGACTCTAGACTCGGAGTATCTCCGCGGCTCCATCGCGGCCGTCCACTCCGTCCTCCGCCACGCGT
CGTGTCCAGAAAACGTCTTCTTCCACTTCATCGCCGCCGAGTTCGACTCGGCGAGTCCACGCGTACTGAGCCAACTCGTCCGGTCG
ACGTTCCCGTCGCTGAGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173827 putative galacturonosyltransferase-like 8 [Arabidopsis thaliana]5618e-056
XP_002893329 hypothetical protein ARALYDRAFT_472678 [Arabidopsis lyrata subsp. lyrata]5511e-054
NP_564983 putative galacturonosyltransferase-like 9 [Arabidopsis thaliana]4731e-045
XP_002887276 hypothetical protein ARALYDRAFT_476133 [Arabidopsis lyrata subsp. lyrata]4623e-044
XP_002271160 PREDICTED: hypothetical protein [Vitis vinifera]4085e-038

Swiss-Prot top hits (Blast detail)Scoree value
O48684 Probable galacturonosyltransferase-like 85614e-057
O04536 Probable galacturonosyltransferase-like 94737e-047
Q8VYF4 Probable galacturonosyltransferase-like 72424e-020
Q9LHD2 Probable galacturonosyltransferase-like 102372e-019
Q0V7R1 Probable galacturonosyltransferase-like 32362e-019

TrEMBL top hits (Blast detail)Scoree value
B9S2I6 Transferase, transferring glycosyl groups, putative4031e-037
B9HMR5 Glycosyltransferase, CAZy family GT83814e-035
B9HLV6 Glycosyltransferase, CAZy family GT83681e-033
B9RUH6 Transferase, transferring glycosyl groups, putative2865e-024
A2YB88 Putative uncharacterized protein2354e-018

Arabidopsis top hits (Blast detail)Scoree value
AT1G24170.1 LGT9; polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups5614e-058
AT1G70090.1 LGT8 (GLUCOSYL TRANSFERASE FAMILY 8); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups4737e-048
AT1G70090.2 LGT8 (GLUCOSYL TRANSFERASE FAMILY 8); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups4737e-048
AT3G62660.1 GATL7 (Galacturonosyltransferase-like 7); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups2424e-021
AT3G28340.1 GATL10 (Galacturonosyltransferase-like 10); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring hexosyl groups2372e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  50%
 
61  50%

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