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Information for unigene UN00836
| FASTA Sequence |
| Unigene ID: UN00836 | Length: 621 |
SSR | | GGAAGACATCTCATTTAAAACCAATCTTTCTTCTTCTTCTTCGTCTTCCTCTTTTCCTTATCTCTCCATCTCTGTGGAGAGACAAA
GGAACATTCTTGAAGTCTTTCTTGCACAATGCTAACTCATTAGCTGATTCAAGCTCAAATCTTTCTTCAAAGCTAAACGTGTTTCT
TGTTCTTCTTCTGATAATAATGCCGTCAAACGCCGTCGTTTTAGCGGCGGTCTTGTGCTTGTTCCTTCTACCACCGTTCGCCGTCG
GGATACGGACGGGTCCGGGGAGGATCACGACCGTCAGCGGCGGAAGAAACGCGTTTAGTAAACTCGGTCCGTTCATGGAAGCTCCG
GAATATAGAAACGGCAAGGAGTGCGCGTCTTCACCTACAAACAGAGAGAACTTCGTGTCGTCTTCTTCTTCTTCTTCCAACGATCC
CTCTCTAGTCCACATCGCGATGACTCTAGACTCGGAGTATCTCCGCGGCTCCATCGCGGCCGTCCACTCCGTCCTCCGCCACGCGT
CGTGTCCAGAAAACGTCTTCTTCCACTTCATCGCCGCCGAGTTCGACTCGGCGAGTCCACGCGTACTGAGCCAACTCGTCCGGTCG
ACGTTCCCGTCGCTGAGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173827 putative galacturonosyltransferase-like 8 [Arabidopsis thaliana] | 561 | 8e-056 |
| XP_002893329 hypothetical protein ARALYDRAFT_472678 [Arabidopsis lyrata subsp. lyrata] | 551 | 1e-054 |
| NP_564983 putative galacturonosyltransferase-like 9 [Arabidopsis thaliana] | 473 | 1e-045 |
| XP_002887276 hypothetical protein ARALYDRAFT_476133 [Arabidopsis lyrata subsp. lyrata] | 462 | 3e-044 |
| XP_002271160 PREDICTED: hypothetical protein [Vitis vinifera] | 408 | 5e-038 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O48684 Probable galacturonosyltransferase-like 8 | 561 | 4e-057 |
| O04536 Probable galacturonosyltransferase-like 9 | 473 | 7e-047 |
| Q8VYF4 Probable galacturonosyltransferase-like 7 | 242 | 4e-020 |
| Q9LHD2 Probable galacturonosyltransferase-like 10 | 237 | 2e-019 |
| Q0V7R1 Probable galacturonosyltransferase-like 3 | 236 | 2e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S2I6 Transferase, transferring glycosyl groups, putative | 403 | 1e-037 |
| B9HMR5 Glycosyltransferase, CAZy family GT8 | 381 | 4e-035 |
| B9HLV6 Glycosyltransferase, CAZy family GT8 | 368 | 1e-033 |
| B9RUH6 Transferase, transferring glycosyl groups, putative | 286 | 5e-024 |
| A2YB88 Putative uncharacterized protein | 235 | 4e-018 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G24170.1 LGT9; polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | 561 | 4e-058 |
| AT1G70090.1 LGT8 (GLUCOSYL TRANSFERASE FAMILY 8); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | 473 | 7e-048 |
| AT1G70090.2 LGT8 (GLUCOSYL TRANSFERASE FAMILY 8); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | 473 | 7e-048 |
| AT3G62660.1 GATL7 (Galacturonosyltransferase-like 7); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | 242 | 4e-021 |
| AT3G28340.1 GATL10 (Galacturonosyltransferase-like 10); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring hexosyl groups | 237 | 2e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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