 |
Information for unigene UN00847
| FASTA Sequence |
| Unigene ID: UN00847 | Length: 903 |
SSR | | GAGTTCCCAAGGCAGAGAACAGTGAGAGGAGAGAGAAGTTGAGAAATAGAGAGAGTGCTTCCAATGGAATCCGAACCCACGGTTGG
TGCCTCTGCATCAGCACCACCACCACCACCAGCAGCCACGATGATCTCCAATCGAGCAACGCATCGTCCCCAGCCGACGCCGCCGC
ACGGCTGATCCACGCCGTGGAGCAGCGGCAGCAGCATCTCCTCGACAAGACCGTCCCTCACGTTCTCTACCGATGGATCGGTTGCC
TCGTCGTCGTGCTGATCTACTTCGTTCGCGTCTACTTGGTGGAAGGCTTCTACATCATCACCTACGCCATCGGAATCTACCTTCTC
AACCTCATCATCGCCTTCCTCTCCCCTCAGGAAGACCCCGAGACCTCGCTCGGCGGCGGGACTCTTCCTACTCGTAGATCCGATGA
GTATCGACCGTTCGTTCGCCGTCTCCCCGAGTTCAAATTCTGGTTATCGATCATTAGGGCATTCGTCATTTGGTTTTATGATGACG
TTCTTCGAAGTCTTTGATGTACCTGTTTTCTGGCCAATTCTTCTTTTCTACTGGGTGATGCTTTTTATCCTCACCATGAGGAAACA
GATACAGCATATGATCAAGTACAGATATGTTCCTTTCTCTTTCGGCAAACAGAAATATGGAAAGAAACCGGCTCCAGTAGAGAGCA
GTGAATGATCAAATCAACCGTTCAGGTCTTTCTTTTCTTTTCTTTTGATTGCCCGAAGCTTTGTTAGGGATTGAGTAAGAAGAAAC
GATCAATCAGATACTCTCATAGCCTGTTTCAGACAAGTTTTTTTTTTGTTGCTCTTTTATCATCCTCCTGACTATGGACTGGTTTC
ACCTGAAAACAATGTATCTTATTAATACAGTTTTTTGTCAGCG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565550 protein RER1C [Arabidopsis thaliana] | 582 | 7e-058 |
| NP_850039 protein RER1C [Arabidopsis thaliana] | 582 | 7e-058 |
| XP_002878676 ATRER1C1 [Arabidopsis lyrata subsp. lyrata] | 567 | 4e-056 |
| AAO23327 putative endoplasmic reticulum retrieval protein [Capsella rubella] | 537 | 1e-052 |
| XP_002307281 predicted protein [Populus trichocarpa] | 441 | 1e-041 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3EBV3 Putative uncharacterized protein At2g23310.2 | 582 | 5e-058 |
| Q84Y11 Putative endoplasmic reticulum retrieval protein (Fragment) | 537 | 8e-053 |
| A9PAG6 Predicted protein | 441 | 1e-041 |
| B9SFZ5 Rer1 protein, putative | 431 | 1e-040 |
| B9HHB7 Predicted protein | 427 | 4e-040 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
