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Information for unigene UN00849

FASTA Sequence
Unigene ID: UN00849Length: 972 SSR 
CGCTGACGAGTGTATGGTTTTGGATAACGAAGCTCTCTACGATATCTGTTTCCGCACATTGAAGCTCTCTAATCCTTCATTTGGTG
ACCTTAACCACCTCATCTCAGCTACCATGAGCGGTGTCACGTGCTGTCTCCGTTTCCCTGGACAACTAAACTCCGACCTTAGAAAG
CTCGCTGTCAATCTCATCCCTTTCCCGAGGCTCCACTTCTTCATGGTGGGTTTTGCGCCACTGACATCAAGAGGGTCGCAGCAATA
CAGCGCCTTAAGCGTCCCTGAGCTAACCCAACAGATGTGGGATGCCAAAAACATGATGTGCGCAGCTGATCCTCGCCACGGACGTT
ACTTGACCGCGTCTGCTCTGTTCCGTGGGAAGATGAGCACTAAAGAGGTCGACGAACAGATGATGAACGTCCAGAACAAGAACTCA
TCGTATTTTGTTGAGTGGATTCCAAACAACGTGAAGTCAAGCGTCTGCGATATTGCTCCAACGGGTTTAAAAATGGCGTCGACTTT
TATAGGAAACTCGACTTCGATTCAGGAAATGTTTAGGCGTGTGAGTGAACAGTTCACTGCTATGTTCAGGAGAAAAGCTTTCCTTC
ATTGGTACACGGGAGAAGGAATGGACGAGATGGAGTTCACCGAAGCTGAGAGTAACATGAACGATCTTGTTGCTGAGTACCAGCAA
TATCAGGATGCTACAGTCGGTGAAGAAGAGTATGAGGAGGACGAAGAGGAAGAAGAAGAAGAAGCTTAAGAAGACATGATTGATTA
CTACTTTCACACAAGCTGTAAGTCGTGTCATTCATTTCTTTGTTATGTTTGTTCCTTTGAATTGAAGTTTCTCTTTTTATGTGCTT
TGTGTGTTTTGTTATTGAACCAATATTTGTACTGGAATGTAAAATCCCTTATGCTCTATGCAAGCATTTCAATGTCAAGCCTATAC
AGTTACTGAGGTTTTAAGCTCTGACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193821 tubulin beta-9 chain [Arabidopsis thaliana]12952e-140
BAH20375 AT4G20890 [Arabidopsis thaliana]12952e-140
XP_002869921 tubulin beta-9 chain [Arabidopsis lyrata subsp. lyrata]12933e-140
NP_199247 tubulin beta-4 chain [Arabidopsis thaliana]12701e-137
XP_002863588 tubulin beta-4 chain [Arabidopsis lyrata subsp. lyrata]12701e-137

Swiss-Prot top hits (Blast detail)Scoree value
P29517 Tubulin beta-9 chain12957e-142
P24636 Tubulin beta-4 chain12706e-139
Q40665 Tubulin beta-3 chain12473e-136
Q41784 Tubulin beta-7 chain12473e-136
P29501 Tubulin beta-2 chain (Fragment)12421e-135

TrEMBL top hits (Blast detail)Scoree value
B9DI08 AT4G20890 protein (Fragment)12951e-140
B9N5R3 Tubulin, beta chain12521e-135
A2YG29 Putative uncharacterized protein12474e-135
A3BEJ5 Putative uncharacterized protein12474e-135
B1PBV8 Beta-tubulin 212474e-135

Arabidopsis top hits (Blast detail)Scoree value
AT4G20890.1 TUB9; GTP binding / GTPase/ structural molecule12956e-143
AT5G44340.1 TUB4; structural constituent of cytoskeleton12705e-140
AT5G23860.1 TUB8; structural constituent of cytoskeleton12383e-136
AT2G29550.1 TUB7; structural constituent of cytoskeleton12356e-136
AT5G12250.1 TUB6 (BETA-6 TUBULIN); structural constituent of cytoskeleton12356e-136

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  67%
 
91  33%

Unigene MembersMember information