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Information for unigene UN00862

FASTA Sequence
Unigene ID: UN00862Length: 765 SSR 
GGGATTCTCCGACCTTCTTAAATCGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGGAAGAGTGAATAACAATTGAAGAAGAAGA
AGAAGAAGATGAGTAGCATTGGAACTGGATACGATCTCTCAGTCACGACCTTCTCTCCCGATGGCCGTGTTTTCCAGATCGAGTAC
GCCGCCAAAGCTGTCGACAACAGTGGAACTGTTGTCGGAATCAAGTGCAAGGACGGGATTGTAATGGGAGTGGAGAAGCTTATTGC
ATCTAAGATGATGCTACCGGGTTCTAACCGGGGATCCATTCTGTTCATCGTCATGCTGGCATGGCTGTTGCTGGACTTGCTGCTGA
TGGGAGGCAAATTGTTGCACGTGCTAAATCTGAAGCCAGAAGCTATGAGAGTGTTTATGGCGACGCTGTACCTGTGAAGGAACTTT
CAGAACGTGTTGCAAGTTATGTTCATTTATGTACTCTCTATTGGTGGCTTAGGCCTTTTGGTTGTGGAGTCATTCTTGGAGGTTAT
GATAAAGATGGACCCCAGTTGTACATGATTGAGCCATCCGGTATTTCATATAGATACTTTGGTGCTGCAATTGGCAAAGGAAAACA
AGCTGCTAAAACGGAAATTGAGAAATTGAAGTTATCTGAGATGACATGCAAAGAAAGCGTTATTGAAGTTGCAAAATCATTTACAA
GCTACACGATGAAGCCAAAGACAAGGCTTTTGAATTGGAGATGAGCTGGATTTGCGAAGAGTCAAAAGAGAGCACCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180270 proteasome subunit alpha type-3 [Arabidopsis thaliana]6596e-067
CAA74027 multicatalytic endopeptidase complex, proteasome component, alpha subunit [Arabidopsis thaliana]6596e-067
XP_002880873 hypothetical protein ARALYDRAFT_481580 [Arabidopsis lyrata subsp. lyrata]6596e-067
O24362 RecName: Full=Proteasome subunit alpha type-3; AltName: Full=20S proteasome alpha subunit G; AltName: Full=20S proteasome subunit alpha-7; AltName: Full=Proteasome component C86372e-064
XP_002299648 predicted protein [Populus trichocarpa]6264e-063

Swiss-Prot top hits (Blast detail)Scoree value
O23715 Proteasome subunit alpha type-36593e-068
O24362 Proteasome subunit alpha type-36371e-065
Q9LSU0 Proteasome subunit alpha type-35965e-061
P90513 Proteasome subunit alpha type-3 (Fragment)4112e-039
Q27563 Proteasome subunit alpha type-34112e-039

TrEMBL top hits (Blast detail)Scoree value
A9PHR5 Proteasome subunit alpha type6263e-063
A9PI94 Proteasome subunit alpha type6245e-063
A5AXI5 Proteasome subunit alpha type6201e-062
C6TG97 Proteasome subunit alpha type6164e-062
B7FHY1 Proteasome subunit alpha type6121e-061

Arabidopsis top hits (Blast detail)Scoree value
AT2G27020.1 PAG1; endopeptidase/ peptidase/ threonine-type endopeptidase6593e-069
AT1G47250.1 PAF2; endopeptidase/ peptidase/ threonine-type endopeptidase2202e-018
AT5G42790.1 PAF1; endopeptidase/ peptidase/ threonine-type endopeptidase2183e-018
AT1G16470.1 PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/ threonine-type endopeptidase1942e-015
AT1G16470.2 PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/ threonine-type endopeptidase1942e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information