RadishBase

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Information for unigene UN00912

FASTA Sequence

Unigene ID: UN00912	Length: 1325	SSR
GGCTCCCCACTTGATTGATTGCGAGAGAGATAAAGGTCGATAAGGTCTTTTCATTTTCCCTTCATCCATCCTCATCGTTTCGCCAG AAGGCTCATCAGAAACAATCTCCTTTGTTTCTCTTTGATGTCTTTTCTCTTCTAAGCTCCTCTGCGGGACAAAAAAAGGCAAAACA GAGATCCAAAAGACAGAGGAGAGAGAGATAGATAAGCTACCTATGGCCGCCGCCGCTATGACCGAGAAGGAAGCTATGGTGGATCC TTTCCTGGTCGAGGCTCTCCAGAACCCTCGTCATCGTCTCACCATTTTGCGTATGGAGCTCGACATACAAAAGTTCTTTCAAAACC CTGACCAGCTTCAGTTCGAGTTCCAACCCTTTCCAACATCATACCTGCGCCTCGCTGCGCATCGAGTCGCTCAGCATTACGGACTA GTAACCATGTCTTTGGAGAACGGTAACGGTGCTTTAGACGGATCCGACAACAGAATCCTGGTAACGAAGATAGCTGAGAGCAGGTT TCCTTCCGTCTGTTTGTCTGAAATCCCTGTTAAGCAGCCTGAGAACGGTAGACCAGAGGGTTTCAAGATCGCCATCAAGGCTAGAC CCAAGAGAGGCTCTGGGAGCGGAGGTAGCGGGTCGGGAGTGCAGCAGAATCTTCTGAGGAGTGTTGAGGAGAGGAAAGAAGAGTAT GATAAGGCCCGTGCTCGGATCTTTAATAGTCCCAGCAGTTCTGACTCTGAAGATCTTCATCGCTACTACGAGCTCCTCCTCCTCCT CCTCCTCTTGAAGTGTAAACCGGATGAGACTGAAGTTGCGTTAGTAATAGTTCTGTTGATGCTGGTTCTCGGACTTCTAGAGTAGC TATTATCAGAGATAGAGAGAAAGATCGGTATGATCCTGATTACGACAGGAGCTATGAAAGATATGTGGTGGATCCTTCCTACAGGT AAACCGTTACATCTCTTCTTGATCAGCTCGCATTCAAGAAACATAATATTGGTATTTTTTTTTCTTGTGGTGATGTTTTGTAGGTA CGTTAGGGTTATGTCACCTGGCCAAGGCTTCAGTCCGATGCCAATGCACATTCCTTTTCACGATGGAGGCTTCCCGCAGATTCCTA GAGGTCCTCAAGCTAATCTAAACTACGGGCATCCGGCTATGAGTCCCTTTGTTAACAACCCGGCGGCTTATACACCGTGGCCAAAC CTGCCGTCTATGAACTATGTGCAGTCGTTGAACCGTCCAGACTTCAGTTGCTCATATTAAAACTTTTGCTGTTATTTCGCCATTTG AGTATTCCTTAATATCAGTTACTTACTCTCTCTTT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_850556 Single-stranded nucleic acid binding R3H protein [Arabidopsis thaliana]	830	2e-086
NP_566381 Single-stranded nucleic acid binding R3H protein [Arabidopsis thaliana]	830	2e-086
XP_002884813 nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]	830	2e-086
AAM64684 unknown [Arabidopsis thaliana]	826	6e-086
BAB11532 unnamed protein product [Arabidopsis thaliana]	718	2e-073

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q3EB95 Putative uncharacterized protein At3g10770.2	830	1e-086
Q9SG83 Putative uncharacterized protein At3g10770	830	1e-086
Q8LBM0 Putative uncharacterized protein	826	4e-086
Q93YN3 Putative uncharacterized protein At5g05100	718	1e-073
Q9FF64 Gb\|AAF19572.1	718	1e-073

Arabidopsis top hits (Blast detail)	Score	e value
AT3G10770.1 nucleic acid binding	830	8e-089
AT3G10770.2 nucleic acid binding	830	8e-089
AT5G05100.1 nucleic acid binding	718	8e-076
AT2G40960.1 nucleic acid binding	523	3e-053
AT3G56680.1 nucleic acid binding	510	1e-051

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	2			40%


9	3			60%

Unigene Members	Member information