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Information for unigene UN00928
| FASTA Sequence |
| Unigene ID: UN00928 | Length: 1059 |
SSR | | GGGGAAAAAGCGTTTATTCAAAAAGAAGCTAGTCTCTATCTCTTCACCCCTTCAACTTAAACACAAAACCAGCTTTCCTCTTTGTA
TCAGACAGGCAAGTCTATGATCATGGCTTCCTCTGCTGCTGCTGCTGTTGCATCGATCTCTCTTGTAACTCTAAGGTACATCTCTC
GCAAACACCAAAACCCTCTTTCGGGTTTCTCCAGTTCCTTCCATAACCTAAGGATCTCATCCAACGGTCCAGCTTTATCCACACGA
TCAAGATCCACCACCTACTCATCCACTCCAGGTTTCTTCAGAACCATGTGCAGCAGCAGCAGCAGCGAGAACTCCAGACCCACTAA
GATCCAAGAACTCAACGTGTACGAGTTCAACGAAGGCGACCGAAACAGCCCCGCGGTTCTAAAACTCGGCAAGAACCCACAACAGC
TCTGCATCGGCGACCTCGTCCCTTTCACGAACAAACTCTACACCGGAGACCTCAAGAAACGCGTCGGGATCACCGCGGGACTCTGC
GTTTTGATCCAGCACGTTCCCGAGAAGAAAGGCGACCGCTTCGAAGCTTCTTACAGCTTCTACTTCGGAGAGTACGGTCACATTTC
CGTTCAGGGACCTTACCTGACTTACGAGGACACGTACCTCGCCATCACCGGTGGCTCCGGAGTCTTCGAAGGTGCCTACGGACAGG
TCAGGCTTCGTCAGCTTGTGTATCCGACCAAGCTGTTCTACACTTTTTACTTGAAAGGTGTTGCCTCTGATTTGCCTGTGGAGCTC
ACCGGAAAACATGTTGAGCCGTCGAAGGATGTGAAGCCGGCGGCGGAAGCTCAGGCGGCTCAGCACGGCGCCACTATCCTAAACTT
TACCGAGTAAAAAAATCATTTGCGTCGTTGAGCTTTCTCTGTTTGTTTTCTCTTGGATCTTAATGGGTCTGTTTAATGGGCCTAAA
TAATGGGCTTTTAAATAATGAGCCGCTTTTCGTAAATCTATCGTGTGTCAAGCAATAGCTGGTTATGGCCTGTGAACCCTTTGCTA
AATAATTTCAAGACATTGGCATATACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172786 allene oxide cyclase [Arabidopsis thaliana] | 1097 | 2e-117 |
| ABV89668 ERD12 protein [Brassica rapa] | 1085 | 4e-116 |
| XP_002889998 hypothetical protein ARALYDRAFT_334627 [Arabidopsis lyrata subsp. lyrata] | 1084 | 5e-116 |
| NP_566777 allene oxide cyclase 3 [Arabidopsis thaliana] | 942 | 2e-099 |
| XP_002875279 hypothetical protein ARALYDRAFT_484340 [Arabidopsis lyrata subsp. lyrata] | 935 | 1e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93ZC5 Allene oxide cyclase 4, chloroplastic | 1102 | 2e-119 |
| Q9LS01 Allene oxide cyclase 3, chloroplastic | 942 | 7e-101 |
| Q9LS02 Allene oxide cyclase 2, chloroplastic | 780 | 4e-082 |
| Q9LS03 Allene oxide cyclase 1, chloroplastic | 774 | 2e-081 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8IXX4 ERD12 protein | 1085 | 3e-116 |
| Q0WP37 Putative uncharacterized protein At3g25780 | 942 | 1e-099 |
| D1GC08 Allene oxidase cyclase | 910 | 6e-096 |
| D1GC09 Allene oxidase cyclase | 909 | 7e-096 |
| D1GC07 Allene oxidase cyclase | 894 | 4e-094 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G13280.1 AOC4 (ALLENE OXIDE CYCLASE 4); allene-oxide cyclase | 1103 | 1e-120 |
| AT3G25780.1 AOC3 (ALLENE OXIDE CYCLASE 3); allene-oxide cyclase | 943 | 5e-102 |
| AT3G25770.1 AOC2 (ALLENE OXIDE CYCLASE 2); allene-oxide cyclase | 781 | 3e-083 |
| AT3G25760.1 AOC1 (ALLENE OXIDE CYCLASE 1); allene-oxide cyclase | 775 | 1e-082 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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