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Information for unigene UN00928

FASTA Sequence
Unigene ID: UN00928Length: 1059 SSR 
GGGGAAAAAGCGTTTATTCAAAAAGAAGCTAGTCTCTATCTCTTCACCCCTTCAACTTAAACACAAAACCAGCTTTCCTCTTTGTA
TCAGACAGGCAAGTCTATGATCATGGCTTCCTCTGCTGCTGCTGCTGTTGCATCGATCTCTCTTGTAACTCTAAGGTACATCTCTC
GCAAACACCAAAACCCTCTTTCGGGTTTCTCCAGTTCCTTCCATAACCTAAGGATCTCATCCAACGGTCCAGCTTTATCCACACGA
TCAAGATCCACCACCTACTCATCCACTCCAGGTTTCTTCAGAACCATGTGCAGCAGCAGCAGCAGCGAGAACTCCAGACCCACTAA
GATCCAAGAACTCAACGTGTACGAGTTCAACGAAGGCGACCGAAACAGCCCCGCGGTTCTAAAACTCGGCAAGAACCCACAACAGC
TCTGCATCGGCGACCTCGTCCCTTTCACGAACAAACTCTACACCGGAGACCTCAAGAAACGCGTCGGGATCACCGCGGGACTCTGC
GTTTTGATCCAGCACGTTCCCGAGAAGAAAGGCGACCGCTTCGAAGCTTCTTACAGCTTCTACTTCGGAGAGTACGGTCACATTTC
CGTTCAGGGACCTTACCTGACTTACGAGGACACGTACCTCGCCATCACCGGTGGCTCCGGAGTCTTCGAAGGTGCCTACGGACAGG
TCAGGCTTCGTCAGCTTGTGTATCCGACCAAGCTGTTCTACACTTTTTACTTGAAAGGTGTTGCCTCTGATTTGCCTGTGGAGCTC
ACCGGAAAACATGTTGAGCCGTCGAAGGATGTGAAGCCGGCGGCGGAAGCTCAGGCGGCTCAGCACGGCGCCACTATCCTAAACTT
TACCGAGTAAAAAAATCATTTGCGTCGTTGAGCTTTCTCTGTTTGTTTTCTCTTGGATCTTAATGGGTCTGTTTAATGGGCCTAAA
TAATGGGCTTTTAAATAATGAGCCGCTTTTCGTAAATCTATCGTGTGTCAAGCAATAGCTGGTTATGGCCTGTGAACCCTTTGCTA
AATAATTTCAAGACATTGGCATATACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_172786 allene oxide cyclase [Arabidopsis thaliana]10972e-117
ABV89668 ERD12 protein [Brassica rapa]10854e-116
XP_002889998 hypothetical protein ARALYDRAFT_334627 [Arabidopsis lyrata subsp. lyrata]10845e-116
NP_566777 allene oxide cyclase 3 [Arabidopsis thaliana]9422e-099
XP_002875279 hypothetical protein ARALYDRAFT_484340 [Arabidopsis lyrata subsp. lyrata]9351e-098

Swiss-Prot top hits (Blast detail)Scoree value
Q93ZC5 Allene oxide cyclase 4, chloroplastic11022e-119
Q9LS01 Allene oxide cyclase 3, chloroplastic9427e-101
Q9LS02 Allene oxide cyclase 2, chloroplastic7804e-082
Q9LS03 Allene oxide cyclase 1, chloroplastic7742e-081

TrEMBL top hits (Blast detail)Scoree value
A8IXX4 ERD12 protein10853e-116
Q0WP37 Putative uncharacterized protein At3g257809421e-099
D1GC08 Allene oxidase cyclase9106e-096
D1GC09 Allene oxidase cyclase9097e-096
D1GC07 Allene oxidase cyclase8944e-094

Arabidopsis top hits (Blast detail)Scoree value
AT1G13280.1 AOC4 (ALLENE OXIDE CYCLASE 4); allene-oxide cyclase11031e-120
AT3G25780.1 AOC3 (ALLENE OXIDE CYCLASE 3); allene-oxide cyclase9435e-102
AT3G25770.1 AOC2 (ALLENE OXIDE CYCLASE 2); allene-oxide cyclase7813e-083
AT3G25760.1 AOC1 (ALLENE OXIDE CYCLASE 1); allene-oxide cyclase7751e-082

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  50%
 
93  38%
 
61  13%

Unigene MembersMember information