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Information for unigene UN00948

FASTA Sequence
Unigene ID: UN00948Length: 801 SSR 
GGGATCTTTTATTCTTCTTCATCGCTTTGATCGTCATCACACAGATCCTCCATTCTCTATTCGTTTCTCCTTGGAGGATCAGATCT
TGGAAGGTCCTCAGCTCAAGGAGAGGAGGAGAAGAAGAAGGGTGAGGAGAGAGAGAGAGAGACTTTGAATTGAAGGATGTCTTCTT
TCACAGGAACTCAGCAGAAATGCAAGGCTTGCGAGAAGACGGTGTACCCTGTGGAGCTTCTCTCAGCTGATGGTGTTAGCTATCAC
AAGTCTTGCTTCAAATGCACTCACTGCAAATCCAGGCTTCAGCTGAGTAGATATTCATCAATGGAAGGTGTGTTGTACTGTAAGCC
TCATTATGAGCAGCTCTTCAAGGAGTCTGGTAGCTTCACCAAGAACTTTCAGTCACCTGTTAAACCGGCGGCTGAGAAATCAAGTC
CTGAGCTGACAAGAACCCCTAGCCGAGTTGCTGGTATGTTTTCAGGCACACAAGAGAAATGCGCCACTTGCAGTAAAACTGTCTAT
CCTATCGAAAAGGTAACAGTGGAGAGCCAGACATATCACAAGTCCTGCTTCAAGTGCTCACATGGAGGCTGCCCTATCTCACCATC
AAATTACGCAGTTCTTGAAGGGATTTTTTACTGCAAGCACCATTTCGTTCAGCTTTTCAAGGAAAAGGGAAGTTACAACCACTTGA
TCAAATCTGCTTCCATCAACGCTCTGCGGCAGCCGCAGTCGCTGCTGGTACACTGCAGCCGCGTTCTGATCTAAAAACTCAAAATC
CTCTCTCTCCTAGTCTAATGAAACTCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879831 LIM domain-containing protein [Arabidopsis lyrata subsp. lyrata]8944e-094
NP_191136 GATA type zinc finger transcription factor-like protein [Arabidopsis thaliana]8926e-094
XP_002876333 LIM domain-containing protein [Arabidopsis lyrata subsp. lyrata]8926e-094
BAH20111 AT3G55770 [Arabidopsis thaliana]8854e-093
NP_181519 LIM domain-containing protein [Arabidopsis thaliana]8837e-093

Swiss-Prot top hits (Blast detail)Scoree value
P29675 Pollen-specific protein SF35455e-055
Q4U4S6 Xin actin-binding repeat-containing protein 22373e-019
Q1LZA7 LIM domain-containing protein 22231e-017
Q4KM31 LIM domain-containing protein 22221e-017
Q9BT23 LIM domain-containing protein 22193e-017

TrEMBL top hits (Blast detail)Scoree value
Q9M047 AT3G55770 protein8924e-094
B9DH94 AT3G55770 protein8853e-093
O04193 At2g39900/T28M21.68835e-093
A9PDK3 Predicted protein8234e-086
A5BSA7 Putative uncharacterized protein8217e-086

Arabidopsis top hits (Blast detail)Scoree value
AT3G55770.1 LIM domain-containing protein8923e-096
AT3G55770.2 LIM domain-containing protein8923e-096
AT3G55770.3 LIM domain-containing protein8923e-096
AT3G55770.4 LIM domain-containing protein8923e-096
AT3G55770.5 LIM domain-containing protein8923e-096

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information