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Information for unigene UN00950

FASTA Sequence
Unigene ID: UN00950Length: 1017 SSR 
GGATTGTTTTGAAAATCGGTGAGCCCTAGAATTCGAGAGAGAGAGAGAGAGTGGAGTGCGAGAGCGTAGCAGTAAAAGTGTTGCCG
TTGGTAACTAACTCTCGTCGATATCTCTCTTGCTCTTGGATTCGACTCTGTTTCGAGAAAGCTACTGCTTCAGGGTGCGGGTCTTA
CCACGAGATGAATTCATATCCATCACGAAATCATATGCAACAACCTGCTACAACAAGCACAACCAAGGAGACAAGCTTGCCTACTT
CTAATCCTCATTGGTTCCATTCTTACTTCCCTGTTCCAAGGACCACAGGCTTTGATCTTTCTCAAGTCCCTCAAGCAGAACCTGCT
GAAGCTACCATGGTACCTCAAGTTCATTTGTTTCCTCCTCCTACATTAGACTCTAGGCACGATATGGAGCAGAAGTCCACGAAGCT
GTCTCCTTCGTTGAAGCCAAAACCACAAAGTAAGAAACGCTCTGCACCCAAAACCCCAAAGAAGACACTGAGCGTACCCGAAATAA
AGCGAGAGAAAAAGAATCCTGACATCAACGTTGTTGACATCTCCAGCTTCGATGTTTCGGGTGCTCCTCCTCCTGTCTGTTCGTGT
ACAGGCGTTCCAAAGGTTTGCTACAAATGGGGCATGGGCGGTTGGCAATCGTCGTGCTGTACCATCAGCATATCGACGTTCCCACT
GCCCATGAGCACCACGAGGCCTGGAACTCGTCTCGCCGGAAGGAAAATGAGCAATGGTGCTTATGTCAAGCTACTTATGAGACTTG
CTGGTGAAGGCTATGACTTGACTTGCCCGGTTGACCTCAGTAACCATTGGGCCAGGCATGGTACTAACAAGTTCGTGACCATCAAG
TAGTCCTTTTGATCAGTTGGGGTTTGGTTTTAGGCTTTTAGCTTTTGTGATTTCCATGTATCTTCGTTTTAGTCTTATCTTTACGT
ACATATGTTTTGTAGTGGCTTTAAAATCATGAAGGAGATTCAGTGTCTATGATCAATAGAACAAGGCATCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181098 basic pentacysteine 7 [Arabidopsis thaliana]8382e-087
XP_002879557 GAGA-binding transcriptional activator [Arabidopsis lyrata subsp. lyrata]8382e-087
NP_850249 basic pentacysteine 7 [Arabidopsis thaliana]8328e-087
ABU50826 GAGA-binding transcriptional activator [Arabidopsis arenosa]8141e-084
ABU50827 GAGA-binding transcriptional activator [Olimarabidopsis pumila]7664e-079

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8L875 Putative uncharacterized protein At2g35550/T32F12.78381e-087
O82286 At2g355508326e-087
A7UN68 GAGA-binding transcriptional activator (Fragment)8147e-085
A7UN69 GAGA-binding transcriptional activator (Fragment)7663e-079
B9RZ34 Putative uncharacterized protein5306e-052

Arabidopsis top hits (Blast detail)Scoree value
AT2G35550.1 BPC7 (BASIC PENTACYSTEINE 7); DNA binding / transcription factor8395e-090
AT2G35550.2 BPC7 (BASIC PENTACYSTEINE 7); DNA binding / transcription factor8387e-090
AT2G35550.3 BPC7 (BASIC PENTACYSTEINE 7); DNA binding / transcription factor8387e-090
AT2G35550.4 BPC7 (BASIC PENTACYSTEINE 7); DNA binding / transcription factor8387e-090
AT2G01930.1 BPC1 (BASIC PENTACYSTEINE1); DNA binding / specific transcriptional repressor/ transcription factor4141e-040

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  67%
 
111  33%

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