Information for unigene UN00977
| FASTA Sequence |
| Unigene ID: UN00977 | Length: 1303 |
| SNP | CCTAAGAAAAACTCTTGTACTCGCTTTCATCAATACAAAGTTCTTTCTTTCTTATTCTCTGATCTTTTACAAAGTTCGATACATCA
AAAGTGTATCAGATTCACGCAGCATGACGAGTATGTTTACTAAGAATACAAACAACAACACAATCAGGTTGAGACATGGCGTAGCA
CAAGCTGAAGCTGATCCATCTCCGGACCAATCAGGTTCATAACGGAGTTCCCTAAATTAGGAAGCTCGGAAACTGCCATTGTTATT
ATAGAAGATGATGATTTGTCAGACAGGTATGGCACTATATGCTTCTTCATGTCTTCATGAGATATCTGAAGATGGTTTCCAGAGAC
GTTAACGAATTTGACCTTTCCAGCTTCGTCTAGAGCTCTCAAACCGATCCAGTCCTCGGTATAGAGCTTGGTCTCTTGTGGTGGAA
GAATGGTCTTAAAAGACCCATCAGGATAATATCCAAACCATGAGGTCTCTTTAGGTATCAGTATCGTATCGTGCTCAAACATAATA
AGCACAAGATTCTCCAAGCTTGAGAACCTCTCTTTATAAGTCGAATTTTTAACTGGGAGTTCGTTGTTTAACTTTGGGAGAAACCT
ACAACCTTCCATGTAACCCGCAATGTCAGTAGGGATTTTGAGAAAACCGCTAGGAGCCAAATGTTCCTGCATATAGTCGCTATAGA
TCTCTGTTTTGATCATACTATCCAACATGATACAAATCCAGGTAACACCACAGAAAGGAATGGATGCAGTGCCAGCATGAGGTCCC
CCTATCGATACAAAACTCTTAACAGGTGGTGCATCATCGCAGAACTCAATGAGAGCTCGACCAATCATGTTACCCTGAGAAAGCCC
CACGATGCTGTAACCATCACTCAGCTCAGGCATACTTTTCACCTTCTCACAAACAACAGCTGTCTGATCAAGAAGAGGCATGGTCC
ATGAGTCCCATGAGCCACTCCCAATCTCCAAGCAATAGCCTTGAGAAGAAGACCAATCACTTAATAGCTCCGTGAAATGTTTCACT
CCTGAATTACTGCATTTATCCCCAATTCCATGTAGAACTATGAAAGGAACAGACGAAGCGACTGTAATGAAAGTGCAGATTAGGGC
AATAATAGTAATCGCTGCCTTATGAACAGCCATTCTCTAGGACTTCGGGTGTGGGAGACTAGAAGGGTAATCAAAAAGATTCGTAA
TCTCTCCGGTACCAGAACGATCTCCGCCGGCGAATTTAGTTTCGTCGCTGACTGATCGTCGCACAGATTTTTTTTTGTTTGTTTTG
TTCGATGAGATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876550 palmitoyl protein thioesterase family protein [Arabidopsis lyrata subsp. lyrata] | 1458 | 3e-159 |
| NP_191593 palmitoyl protein thioesterase family protein [Arabidopsis thaliana] | 1457 | 4e-159 |
| AAK59537 putative palmitoyl-protein thioesterase precursor [Arabidopsis thaliana] | 1446 | 8e-158 |
| AAM65342 palmitoyl-protein thioesterase precursor-like [Arabidopsis thaliana] | 1445 | 1e-157 |
| AAR92492 putative palmitoyl-protein thioesterase [Tropaeolum majus] | 1200 | 3e-129 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q20390 Palmitoyl-protein thioesterase 1 | 409 | 6e-039 |
| Q54CM0 Palmitoyl-protein thioesterase 3 | 402 | 4e-038 |
| P45479 Palmitoyl-protein thioesterase 1 | 375 | 5e-035 |
| O88531 Palmitoyl-protein thioesterase 1 | 372 | 1e-034 |
| O59747 Palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase fusion 1 | 312 | 1e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LY31 AT3G60340 protein | 1457 | 3e-159 |
| Q93Y57 Putative palmitoyl-protein thioesterase | 1446 | 5e-158 |
| Q8LAH5 Palmitoyl-protein thioesterase-like | 1445 | 7e-158 |
| Q6R749 Putative palmitoyl-protein thioesterase | 1200 | 2e-129 |
| B9RD11 Palmitoyl-protein thioesterase 1, putative | 1160 | 8e-125 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G60340.1 palmitoyl protein thioesterase family protein | 1545 | 1e-171 |
| AT3G60340.2 palmitoyl protein thioesterase family protein | 1545 | 1e-171 |
| AT5G47330.1 palmitoyl protein thioesterase family protein | 936 | 4e-101 |
| AT4G17480.1 palmitoyl protein thioesterase family protein | 918 | 5e-099 |
| AT4G17483.1 palmitoyl protein thioesterase family protein | 906 | 1e-097 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Software error:
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For help, please send mail to the webmaster (feibioinfolab@gmail.com), giving this error message
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