Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN01001

FASTA Sequence
Unigene ID: UN01001Length: 1147 SSR 
CCAACCAAAATAACACGCCAAGTGATCAAAAGATGACAGATACAAATCTAAACACGCTCTTCTATTTCCCATAGAATCATATATCA
TATTACACAAATCGCTTAGTCGACAACAACATTTAACTAAGGTGATCAATCTATAGACCTTGTCAAGTGGGTTTTGGGTCTGGGGC
CAGGACCAAGACTACTCCTTTCCTTAAGATTATGGCACTGCTTCAAAGATCTTTGGCCATACGAAAGAATCACATTTCTACAAACT
TGAGATAAAGATGAAAAGAAAGAAAAAAAACTATATATATATAGTGAGCTCTCAAGCTTCTTTTAAGATAATTTACAGGTAATTAA
GGGAAACCGAATGACTTCACAAGTCACCCAAAAGGCTCTTGCTTCATATGGAAACCGCCATTTTGCATTGTGTTGAAAGGCAGCGC
CAAAGTTGAATAACTCAATAAGGTAGCTGAAAGATCATCATCTATTGCAACCGGCAATGGTGGCATCTGGCTCATCAAGCCAGGCA
TATTATTCATGTCGTTTTGGATGGAGATAAGGTTGTTCCTTGCCTGATAGAAGAGATCTATGTTATCATGTGCCTTGTATGAGGAG
AGATTAGCTCTAATTTGACTAAATGCTCTTACATTCTGGTCTAAGAGACTGATCGCATTGCCGCTTAAATCTGAGGTTGTAGAGGG
CATTAAGAAAGGGTAGGAAGCCATGCTAGAAGGCGAAACAGAAGGTATGCTCGAAGTCAATTCCACCTGCTTGCCCTTGCTATAAC
TTATCCTTTTTCCACAGTTTATTTCTTCTGCTTTCCTTCTCTTTCTCGTCATCCATCTACACCTTAAAGCAACATCTCGAACAGTT
TTGTCAGGTAAAGTGGCTGCAATTTTGATATACTTCATGATACTTGGCTTATCCTTATAATTCTCAAGGCCAACCACATACTCCGA
CAAAAACAAACCCCAAAAACTACCTCTAAACCCTCACCATCCCTCCCCTTACAAATCAACTAAAAAGGAACAAACTTTAGCACTTT
AAGAATCGAAATCAAACTTTCCCTTGGATTCTCGGAGATCCAACTCCAAACTCGAAGCCCTTTTGATTAGATATGAAAAAGACAGA
CCTTGAGAAAGTGAATCATGTTAAGCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887153 hypothetical protein ARALYDRAFT_475902 [Arabidopsis lyrata subsp. lyrata]6251e-062
NP_564923 uncharacterized protein [Arabidopsis thaliana]5944e-059
AAM62484 unknown [Arabidopsis thaliana]5944e-059
AAG52601 hypothetical protein; 95246-97368 [Arabidopsis thaliana]5919e-059
XP_002518814 conserved hypothetical protein [Ricinus communis]5093e-049

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8GZ67 At1g681605943e-059
Q8LET0 Putative uncharacterized protein5943e-059
Q9C9F1 Putative uncharacterized protein T22E19.215916e-059
B9RY47 Putative uncharacterized protein5092e-049
B9HJQ7 Predicted protein4671e-044

Arabidopsis top hits (Blast detail)Scoree value
AT1G68160.1 unknown protein6254e-065
AT1G10820.1 unknown protein4401e-043
AT1G10820.2 unknown protein4401e-043
AT1G60670.2 unknown protein4184e-041
AT3G07565.1 DNA binding3217e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  100%

Unigene MembersMember information