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Information for unigene UN01011
| FASTA Sequence |
| Unigene ID: UN01011 | Length: 1489 |
SSR | | TTCTTCTTTGTCTTTCTCCCCACATAAAGATATAACTGGTGAATAATTTATAAAACCCTAACTTTGGACCTCAACTCCCTTTTTCG
ATTCCTCCTCATCTGCTGGTCTTCATCAAGCAAAGCAATGGCGTCCGGCAGCGGAGGAGAGACGGGTAAATCGGTGGAAATCGGAT
CGGACTCGACCAAATTAGGAGGAGTGGGGAGCAGAAGCGCTGGAGGAGGAGGTGAATACGTGAGGGCGGATACTCTAGATTTCAAA
AAATGGGATTTGAATATGGGCGGTCAACCCTCCTCCTCTGCCGCCGTGAAGTCAAGGAAGAGTCCGATGCAGGAATGGGAGATCGA
CCTCTCCAAGCTCGATATGAATCACGTCCTCGCTCGCGGCACTTACGGCACTGTCTACCGCGGTGTCTACGCCGGTCAACAAGTCG
CTGTGAAGGTATTAGATTGGGGAGAAGATGGTGTCTCAACAGCAGATGATCTCCGCATTTCCTTCGAACAAGAGGTTGCCGTCTGG
CAGAAGCTCCATCATCCCAACGTTACCAAGTTTATAGGAGCATCCATGGGAACCTCTGATCTCAAGATCCCTTCTTCTAGTGATTC
TCTTGGACATGGCAACTCTGCACACCCTGCCAAGGCCTGTTGTGTTGTCGTTGAGTATGTTGCTGGTGGCACCCTCAAGAAGTTCC
TCATCAAGAAGTATCGCACCAAACTCCCCATCAAGGATGTCATTCAGCTCGCTTTGGATCTCGCTAGAGGGCTGAGTTACCTCCAC
TCCAAGGCGATTGTACATCGGGACGTCAAGTCAGAGAACATGTTACTTGAACCTAACAAGACCCTCAAGATTGCTGATTTCGGAGT
CGCTAGAGTCGAGGCTCAGAACCCTCAAGACATGACCGGTGAAACTGGAACTCTCGGCTACATGGCACCTGAGGTTCTAGAAGGAA
AGCCTTACAACAGGAAATGCGATGTGTATAGTTTTGGTGTATGTCTCTGGGAAATATACTGCTGCGACATGCCCTACGCTGACTGT
AGTTTTGCTGAGATCTCTCATGCTGTTGTTCATAAGAATCTGAGACCAGAGATTCCGAAATGCTGCCCACAGTCGGTGGCAAACAT
AATGAGGAGATGCTGGGACCCGAATCCAGACAAGCGACCGGAGATGGAGGAGGTAGTGAAGCTGCTTGAAGCGGTAAACACAAGCA
AAGGCGGGGGAATGATACCACCCGACAAGTTTCAGGGGTGCCTCTGTTTCTTCAAACCTCGTGGCCCCTGATCTCTCTCTCTCTCT
CTCTCCCTTGGCTCTGAATATTCTTGAGAGCTGCGTGATTTTTTTTTTTTTCCGAATTTTTGTTGAGACATTGGAGTTGGATTGGT
GTGGTCTTTGTCATAAACAATCCATCTCTCTCTATATATATATGTATTTATACTACTACTAGTACACAGTTCTGTTGTGTATAAAA
CTGATGATAAAAGCTTTTTTTCTTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33752 unnamed protein product [Thellungiella halophila] | 1731 | 8e-191 |
| NP_191885 protein kinase family protein [Arabidopsis thaliana] | 1691 | 4e-186 |
| ABK06454 flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] | 1691 | 4e-186 |
| AAM63482 ATMRK1 [Arabidopsis thaliana] | 1684 | 2e-185 |
| XP_002878508 hypothetical protein ARALYDRAFT_486830 [Arabidopsis lyrata subsp. lyrata] | 1562 | 3e-171 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q2MHE4 Serine/threonine-protein kinase HT1 | 441 | 1e-042 |
| Q66L42 Mitogen-activated protein kinase kinase kinase 10 | 414 | 2e-039 |
| Q7T2V3 Mitogen-activated protein kinase kinase kinase 10 | 402 | 4e-038 |
| Q02779 Mitogen-activated protein kinase kinase kinase 10 | 400 | 8e-038 |
| Q16584 Mitogen-activated protein kinase kinase kinase 11 | 391 | 8e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O22100 ATMRK1 | 1691 | 2e-186 |
| Q8LCP3 ATMRK1 | 1684 | 2e-185 |
| Q3E6U7 Putative uncharacterized protein At3g63260.2 | 1337 | 3e-145 |
| B9GSK4 Predicted protein | 1330 | 2e-144 |
| B9H8B9 Predicted protein | 1328 | 3e-144 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G63260.1 ATMRK1; kinase/ protein serine/threonine/tyrosine kinase | 1692 | 1e-188 |
| AT3G63260.2 ATMRK1; kinase/ protein serine/threonine/tyrosine kinase | 1337 | 1e-147 |
| AT3G22750.1 protein kinase, putative | 1255 | 5e-138 |
| AT3G01490.1 protein kinase, putative | 1200 | 1e-131 |
| AT4G14780.1 protein kinase, putative | 1176 | 7e-129 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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