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Information for unigene UN01023

FASTA Sequence
Unigene ID: UN01023Length: 657  SNP
AATATGTATTTTTGCATCTTCAAAACATGAAAGGATTGCATTCAATTCAATCTGTGATTCCGTATTTTATCTTTGCTAGTGGAAAA
CTTATTTTTTCAGATTTATTACAAACACATCGTTTCTCATAATAAAAGAAAAAATAAATTACAACACAACCATCACAATCATTCAT
ATAAATAAATAGACTTCATACAGAATAATATTCTGATGATAATACACACCTCAAAGAAACAAGAAAGAACCGGCGATGGATGTAAC
ACCAACAACGAACGCAGAGAGGCTAAGAGCAGCCGCCCCATTGTCAGCAGCATCGGTAGAAGGTGAAGGTCCATTGCTACCGTAGG
AGGAGTCACTTCCTAGAGGACCAGCCACAGCCACGTCACCATCACCTGGAGAAGCAGCTGCATCGTCGTCGGTGGTTCCAATGGTA
TCCTCGCTCACTGGAGCTTCGACATCAGTTTTGGGAGCCGCCGGAGCTTTGGAGGGTGACGCTGAAGGAGACGGAGAGGATGCAGC
TGCGGCAAGGCCAAGGACAGTCAAGAACACGAGGCCAAAAACTACGATAGCGTTTTGGCGACCCATTCTTCTCTCTCCCCTTTTAG
GTAGCTCTCTTTTATTTTATTGTAGGTTTGAGGTATAGAGATTGTGATGATTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA48292 bgp1 [Brassica rapa]5295e-052
P41507 RecName: Full=Anther-specific protein BCP14938e-048
XP_002893445 hypothetical protein ARALYDRAFT_890221 [Arabidopsis lyrata subsp. lyrata]4462e-042
AAM64679 putative agp1 [Arabidopsis thaliana]4382e-041
NP_173860 homolog of Brassica campestris pollen protein 1 [Arabidopsis thaliana]4363e-041

Swiss-Prot top hits (Blast detail)Scoree value
P41507 Anther-specific protein BCP14934e-049

TrEMBL top hits (Blast detail)Scoree value
Q07634 Bgp1 protein5294e-052
Q8LBM3 Putative agp14381e-041
Q9FYL2 F21J9.184362e-041
Q38973 Agp1 protein4031e-037
Q0IGN3 At1g245203951e-036

Arabidopsis top hits (Blast detail)Scoree value
AT1G24520.1 BCP14371e-043
AT3G26110.1 FUNCTIONS IN: molecular_function unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: BCP1 (TAIR:AT1G24520.1); Has 20 Blast hits to 20 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1466e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  60%
 
121  10%
 
103  30%

Unigene MembersMember information