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Information for unigene UN01083

FASTA Sequence
Unigene ID: UN01083Length: 1525 SSR 
GATTGCATCTTCCACTAGAGCAGTTCTGCTTCAAAGACATCAAGGCTTTCGGTTTCACAGTCAGAGACCAGTAATTACCATCCCAC
ACGTCCAACTAGAAGTAGCTCACTGACTCGCCCATCTATTTCTAACTCAGGCCGTTCACCATCTTCCATCCTGAACACTAGTTCAG
CTTCAGTCTCATCCTACATCAGACCTTCATCCCCTAGCTCCCGTTCCTCATCTTCAGCTAGAACTCCCACTCCCACCCGTACTAGT
ACTACTTCCCTTTCACGTGCCTCAACTCCATCAAGAATCCGTCCTGTGTCATCTACTTCGTCTCTGGACAAGGCCAGACCTTCCTT
AAGCTCAAGACCATCTACTCCAACTTCTAGAACACAGTCAAACTCACCAAACATAGTTGCTTCTAGACCAAACTCTCGTCCTTCAA
CCCCTACGCGTCGAAACACATCCACCTCCGCAACAAATGGTCGTACCGCACCTTCATTGTCTAGGCCAAGCTCTCCTGGACCACCT
AGAGTCCGAACCACCACCACCACCACACAACAGCCAATTGTGTTACCGGACTTCTCTCTTGATGCACCGCCTAATCTCAGAACAAC
TCTCCCGGGGAGACCAGTATCAGCTGGCAGGTCTAGGCCAGTCGCAGCAAAGGCAAGTCCTGAACCCAAAGGTCCCATCACAAGAA
GGAACTCATCTCCTGTTGTGACGAGAGGAAGACTCATAGCAGAGACACAAGGAAAAGGCCGTTTGAGTGGTGGTAACGGACAGCAA
CATAACGCAGATGCACCAGAGCCCAGAAGGATTTCAAACGTTTCAGATGTAACTTCACGGAGAACTCTGAAGACTTCTTCAACTGT
GACGACGGACAATAACAACGGTCTTGGGAGGTTATTCTCAAAAAGTTCACTTGATATGGCCATTAAGCACATGGACATAAGAAACG
GGAAGAGTAACGGTTGCGCAATATCAAGCACGTCGTTATTCCCTCAGAGCATCAGACAAGCCTCGTCCAAGATCCAGCCAATCCGT
TCAGTGAATAGCCAATCGGATTCTGTCAGCAGCAACAGCGCAGAGAACGGGAATGAAGGAAGCGAGGGAAGAAGACTGATGGGGAA
GTTGAGTGACAGGGACTTGTATGAGAGCTCAAGGTATGACGCATTGCTGATGAAAGAAGACGTCAAGAACACAAACTGGTTGCATA
GCATCGATGATAGGTCGTCAGAACATGGACTCATGTTTGATAATGGAGGATTCGAGCTGCTTCCTGAGCCTTTTGGTCCACTATAA
CACACACACACACACACACCACAAGTAAACAATTTCTTTCTAAAACCACTTCTCTTTTTTTTTTTTACACAATTTGTTTGCTTGTG
GAAAGAGACAGGACTGTAAGATATAAAGGCTCTAGTGGTTTGTAACTTTGTGGTTCTTGAGTGAGAGGAGACATCAACTTGTGTCT
TCTTTTGGAACTTGTCATGTAAAGGATCTTGATTCTTAAAGGAAATTAAACAATTAGAATGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187479 uncharacterized protein [Arabidopsis thaliana]16323e-179
CBZ30607 proteophosphoglycan ppg1 [Leishmania mexicana MHOM/GT/2001/U1103]2594e-020
XP_843163 proteophosphoglycan 5 [Leishmania major strain Friedlin]2399e-018
XP_843164 proteophosphoglycan ppg1 [Leishmania major strain Friedlin]2301e-016
EAW64177 hCG2042888, isoform CRA_a [Homo sapiens]2263e-016

Swiss-Prot top hits (Blast detail)Scoree value
Q17RH7 Putative protein TPRXL2233e-017
Q75JC9 Uncharacterized protein DDB_G02716701992e-014

TrEMBL top hits (Blast detail)Scoree value
Q9C9Y9 At3g0867016322e-179
Q4FX62 Proteophosphoglycan 52396e-018
Q4FX61 Proteophosphoglycan ppg12307e-017
Q6VBJ4 Epa5p2234e-016
Q4FX63 Proteophosphoglycan ppg42234e-016

Arabidopsis top hits (Blast detail)Scoree value
AT3G08670.1 unknown protein16337e-182
AT3G09000.1 proline-rich family protein2752e-024
AT2G40070.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 94255 Blast hits to 49644 proteins in 1573 species: Archae - 225; Bacteria - 11215; Metazoa - 37735; Fungi - 21320; Plants - 3339; Viruses - 2662; Other Eukaryotes - 17759 (source: NCBI BLink).2619e-023
AT2G40070.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 92805 Blast hits to 48882 proteins in 1559 species: Archae - 225; Bacteria - 11081; Metazoa - 37135; Fungi - 20962; Plants - 3300; Viruses - 2664; Other Eukaryotes - 17438 (source: NCBI BLink).2619e-023
AT3G51540.1 unknown protein2205e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  33%
 
81  33%
 
91  33%

Unigene MembersMember information