Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN01113

FASTA Sequence
Unigene ID: UN01113Length: 881 SSR 
GGGTTGATCTCGTCTCTCTCTCTCCATCGTTAACTTCGCACAAGTCGTTGCGTTAAGTCAACACAGATCAGATTCAAACGAGAGAG
GAGAAGAAGAAGAAGATGGCGGCGACTGTGCACTCTCCGATCGTGACGTACGCATCGATGCTATCGCTACTCGCTTTCTGTCCACC
TTTCGTTATTCTCCTATGGTACACGATGGTTCATCAGGATGGTTCAGTTATCCAGACGTGTAGCTTCTTGTGGGAGAATGGAGTTC
AGGGGCTCATCAACATATGGCCAAGACCCACTGCCATCGCTTGGAAGATCATCTTTTGCTACGGAGCATTTGAGGCTGCTCTTCAG
CTTCTTCTTCCTGGTAAAAGAGTTGAAGGTCCGATTTCTCCTACGGGGAACCGACCGGTTTACAAGGCCAATGGTATGGCTGCTTA
TTTTGTGACACTAGCCACCTATCTTGGTCTTTGGTGGTTTGGGATATTCAACCCTGCAATTGTCTATGATCATTTGGGTGAAATAT
TTTCGGCGCTGATATTCGGAAGCCTCGTGTTCTGTGTTTTGTTATACGTAAAGGGTCATGTTGCGCCTTCATCAAGTGATTCTGGT
TCATGTGGTAACCTGATTATCGACTTCTATTGGGGCATGGAGTTGTATCCTCGAATTGGTAAAAACTTCGACATCAAGGTTTTTAC
TAATTGCAGATTTGGTATGATGTCTTGGGCTGTTCTTGCCGTCACGTACTGCATTAAACAGTATGAAATAAACGGGAAAGTATCTG
ATTCAATGTTGGTGACACTATCCTGATGCTGGTGTATGTCACGAATTTTTCTGGTGGGAAGCGGGTACTGGACACCATGGACATCG
CACATGACCGAGCTGGATCTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175460 7-dehydrocholesterol reductase [Arabidopsis thaliana]11883e-128
XP_002894252 hypothetical protein ARALYDRAFT_474170 [Arabidopsis lyrata subsp. lyrata]11858e-128
AAC49278 sterol delta-7 reductase [Arabidopsis thaliana]11831e-127
NP_001077693 7-dehydrocholesterol reductase [Arabidopsis thaliana]11652e-125
AAR29980 sterol delta-7 reductase [Tropaeolum majus]10952e-117

Swiss-Prot top hits (Blast detail)Scoree value
Q9LDU6 7-dehydrocholesterol reductase11882e-129
Q5UQI4 Probable 7-dehydrocholesterol reductase2087e-016
O88455 7-dehydrocholesterol reductase2052e-015
Q9Z2Z8 7-dehydrocholesterol reductase2033e-015
Q7ZXH1 7-dehydrocholesterol reductase2023e-015

TrEMBL top hits (Blast detail)Scoree value
Q0WU95 Sterol delta7 reductase11882e-128
A8MS34 Uncharacterized protein At1g50430.211651e-125
Q6S5A3 Sterol delta-7 reductase10951e-117
B9RHV1 7-dehydrocholesterol reductase, putative10753e-115
Q2QCX7 Sterol delta-7 reductase DWF510753e-115

Arabidopsis top hits (Blast detail)Scoree value
AT1G50430.1 DWF5 (DWARF 5); sterol delta7 reductase11881e-130
AT1G50430.2 DWF5 (DWARF 5); sterol delta7 reductase11657e-128
AT3G52940.1 FK (FACKEL); delta14-sterol reductase1729e-013
AT3G52940.2 FK (FACKEL); delta14-sterol reductase1729e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  33%
 
102  67%

Unigene MembersMember information