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Information for unigene UN01140
| FASTA Sequence |
| Unigene ID: UN01140 | Length: 745 |
SSR | | GGAAGCTAAAGGCAAATCAAATAAAGAAGGTCGCGAGGATTAAACGTGCACCGAATCTCTCTCTCTCTCTCTGATCGATTCCGCCA
TCGCGTAAACCAGCTCCGGCGTAGTGCTCTGTTCGTTTGTTCTTCGGAAAGATACGATTGATGATTTCTAGGTGAAAGAAATAAAG
AAAGTAAGAGTGTCTCTTCCGGCGATTTCGACATGGAATCCGTATACTCCAGCGGCGGCGTAATGAAGCTAGAACCGTCGATCGCG
GCATGGCATTTCCAGATTGCAGTCTATTTCGCCTTCGGATTCTTCTTTCTGAGGCTCTTCCTCGATAGATTCGTCTTTCAAAGGAT
AGCTGTATGGCTTTTGACTACTGGTTCTACGCCAATTAAAATGAAGGATGCTGCTACTCGTGCAAAGCTCATCAAATGCAAGGAGT
CTCTCTGGAAACTGCTCTACTTTGGTGCTTGTGAGATTTTCGTCCTCAATGCCCTTTATCACGAGCCTTGGGCCACTGATATTAAA
CTCTTCTTTCGCGGTTGGCCTAACCAAGACCTCAAGTTTCCAATAAAGCTTTACTATATGTGCCAGTGCGGTTTCTATGTGTATGG
TGTTGCTGCCTTGCTTGCATGGGAGACCAGAAGAAAGGATTTTGCTGTTATGATGTCTCACCATGTCATCACTATCATCCTCATTG
CCTACTCATACCTAACCAGCTTTTTCCAGATTGGAGCTATCATCCTAGCCCTTCATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188557 LAG1 longevity assurance homolog 2 [Arabidopsis thaliana] | 802 | 1e-083 |
| AAF66103 LAG1 homolog 2 [Arabidopsis thaliana] | 802 | 1e-083 |
| XP_002885303 hypothetical protein ARALYDRAFT_318682 [Arabidopsis lyrata subsp. lyrata] | 758 | 2e-078 |
| XP_002518765 longevity assurance factor, putative [Ricinus communis] | 578 | 1e-057 |
| CBI32408 unnamed protein product [Vitis vinifera] | 573 | 5e-057 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LJK3 LAG1 longevity assurance homolog 2 | 802 | 7e-085 |
| Q84QC0 ASC1-like protein 3 | 471 | 2e-046 |
| Q6NQI8 LAG1 longevity assurance homolog 3 | 354 | 6e-033 |
| Q9M6A3 Protein ASC1 | 345 | 7e-032 |
| Q6EUN0 ASC1-like protein 1 | 341 | 2e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RYI1 Longevity assurance factor, putative | 578 | 1e-057 |
| B9N4Y1 Predicted protein | 540 | 2e-053 |
| A9NUL2 Putative uncharacterized protein | 495 | 4e-048 |
| Q10NP1 Longevity-assurance protein containing protein, expressed | 471 | 2e-045 |
| A2XET9 Putative uncharacterized protein | 467 | 7e-045 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G19260.1 LOH2 (LAG ONE HOMOLOGUE 2) | 802 | 6e-086 |
| AT1G13580.1 LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) | 354 | 6e-034 |
| AT1G13580.2 LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) | 354 | 6e-034 |
| AT1G26200.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Longevity assurance, LAG1/LAC1 (InterPro:IPR016439), TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) (TAIR:AT1G13580.2). | 318 | 8e-030 |
| AT3G25540.1 LAG1 | 290 | 1e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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