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Information for unigene UN01170
| FASTA Sequence |
| Unigene ID: UN01170 | Length: 1003 |
SSR | | GGAAAACACTTCCATCATAAACCAGAGAGAGAGAGAAAGAGAGATAAAATGGCGTAAGCGCGTGTTTCCTACACCAGAGCGCACTA
GCCTCCTCAGCCGCACGATCATCGTCTCCCAACTCATCCCAGCGCCACTTGTCACTCTCCAGACCCGTTCAGATAGTCTGTAAAGC
ACAACAGCACCATGATGAGGATAACTCCGCTGTCTCTCGCCGTCTAGCTCTCACACTCTTGATCGGCGCCGCCGTCGTTGGTTCCA
AAGTATCACCCGCTGATGCCGCCTACGGTGAAGCTGCTAATGTGTTTGGGAAGCCAAAGACGAACACAGACTTCACTGCATACAGT
GGAGATGGATTCATTGTGCAGGTGCCAGCTAAATGGAACCCAAGCAGAGAGGTAGAGTATCCAGGACAAGTCCTTAGGTATGAAGA
CAACTTTGACGCCACTAGCAGTCTCAATGTCATGGTCACTCCTACTGACAAGAAGTCCATCACTGACTACGGTTCCCCTGAAGAGT
TCCTCTCTCAGGTCAACTATCTCCTTGGTAAACAAGCTTACTTTGGAGAGACTGCCTCTGAGGGAGGTTTTGACAACAATGCAGTG
GCGACAGCAAACATTCTGGACACAAACATTCAGGACGTTGGTGGGAAGCCATACTATTACTTGTCAGTGTTGACAAGAACAGCAGA
TGGAGACGAAGGTGGTAAGCATCAGCTGATCACAGCCACCGTGAATGTAGGGAAGCTATATATCTGCAAAGCGCAAGCTGGAGACA
AGAGGTGGTTCAAGGGAGCCAATAAGTTTGTTGAGAAAGCAGCCACTTCTTTCAGTGTTGCTTAAATTGAAAAGCAACACAACAGA
AGAAGTCCTCTGCTTTTCTTTTGAAACTAAGCTTTTGAGAACTATCTAGATAATGATGCTACCTAGGAAGCTTCACCTGTGTCCTG
TGATAACAGAACTCATATGCAATAATGATATTATTAATTAATAGTCAAAAGTCTTTG
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| GenBank top hits (Blast detail) | Score | e value |
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| BAJ34178 unnamed protein product [Thellungiella halophila] | 1250 | 3e-135 |
| XP_002889614 oxygen-evolving enhancer protein 2 [Arabidopsis lyrata subsp. lyrata] | 1224 | 3e-132 |
| NP_172153 oxygen-evolving enhancer protein 2-1 [Arabidopsis thaliana] | 1223 | 4e-132 |
| P11594 RecName: Full=Oxygen-evolving enhancer protein 2, chloroplastic; Short=OEE2; AltName: Full=23 kDa subunit of oxygen evolving system of photosystem II; AltName: Full=23 kDa thylakoid membrane protein; AltName: Full=OEC 23 kDa subunit; Flags: Precursor | 1219 | 1e-131 |
| CAA68801 23 kD subunit [Sinapis alba] | 1159 | 1e-124 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q42029 Oxygen-evolving enhancer protein 2-1, chloroplastic | 1223 | 2e-133 |
| P11594 Oxygen-evolving enhancer protein 2, chloroplastic | 1219 | 5e-133 |
| Q96334 Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) | 1053 | 8e-114 |
| Q7DM39 Oxygen-evolving enhancer protein 2-1, chloroplastic | 1037 | 6e-112 |
| P29795 Oxygen-evolving enhancer protein 2, chloroplastic | 1012 | 5e-109 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q04126 23-kDa ploypeptide of photosystem II oxygen-evolving complex | 1031 | 5e-110 |
| B9S6F7 Oxygen-evolving enhancer protein 2, chloroplast, putative | 992 | 2e-105 |
| A9PGP9 Putative uncharacterized protein | 965 | 2e-102 |
| A9PHM0 Putative uncharacterized protein | 957 | 2e-101 |
| B5BT07 23 kDa protein of the oxygen-evolving complex | 943 | 8e-100 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G06680.1 PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | 1224 | 1e-134 |
| AT2G30790.1 PSBP-2 (photosystem II subunit P-2); calcium ion binding | 1023 | 2e-111 |
| AT1G06680.2 PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | 874 | 4e-094 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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