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Information for unigene UN01192
| FASTA Sequence |
| Unigene ID: UN01192 | Length: 1273 |
| SNP | GGATAGACTCTGTTTGCCAAAAAAAAGGATAGACTCTCTTGACTTGCTCCAAACTTAGCAAATGGAGGATCTTGATCCAACTTTCA
TCCAAGCACCAGAGCATAGATCAAACTCCAACTCCATCCCTAACCAACCGGAAGAAATACCCGTGATCGATCTCTCACGTCTCAAC
GACCCTGAAGATATCCAAAACGTGATCTCTGAGATAGGTGATGCATGTGAAACATGGGGATTTTTCCAGGTGATCAATCATGGTGT
ACCTTGCGATGCGAGGAAGCGTGTGGAGGAGACGGTGAAGATATTTTTCGATTTGCCTATGGAAGAGAAGATCAAAGTAAAGAGAG
ACGAGGTGAATCCAGCAGGGTATCATGATGGAGAACACACGAAGAACGTTAGAGACTGGAAAGAAGTGTTTGATATTTATTTCAAA
GATCCAATGGTTATGCCTTTTTCCACAGATCCTGAAGACGATCGTTTAAGAGTTGTTTATAACAAGTGGCCTCAGTTTCCTTCTGA
TTTCAGGGAGGCATGTCAGGAATATGCAGGCCACGCTGAAAAACTAGCGTTCAGACTTTTAGAGCTCATCTCATTAAGCTTAGGCT
TACCAAAAGACCGTTTTCATGATTACTTCAAAGAACAAATGAGTTTTTTCAGGATCAATCGTTATCCACCATGTCCACGGCCTGAC
CTAGCTCTAGGTGTAGGCCACCACAAAGATGCAGACGTTATAAGTCTATTGGCTCAAGACGAAGTTGGAGGGTTACAAATTAGTCG
TAGATCGGACGGTGTTTGGTTTCCTATTAAACCTGTCCCTAATGCTCTTGTCATCAATATTGGCAATTGTATGGAGGGATGGACGA
ATGATAAGTACTGGAGTGCAGAACATAGAGTGGTGGTGAACTCAACAAGGGAAAGATACTCAATACCGTTCTTCTTGTTGCCTTCA
CATGATGTGGAAGTGAAACCATTAGAAGAGCTTTTGAGTCCTGAAAACCCTCCAAGATACAAAGGATATAAATATGGCAAGTTTTA
TGTCAGCAGAAACAGAAGCGATTTTAAAAAGCTCGAGATCCAAAACATTCAGATCGATGAATTCAAAATTGTAACATAGAACTACT
GGTACTATGTGTGACTTGGGTTTTTCAAGCTATGATCTCAATGTAAGCCATTAATGTAATAATGTGTGTGAGACTGAGTCTTTGTC
AGAAACAATAAAGTTGATAATGTTTAATGGAAGTTTGTGAGGTTTTGATAACAACCCGAATTAGTAGTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM65669 unknown [Arabidopsis thaliana] | 1723 | 6e-190 |
| NP_566624 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 1720 | 1e-189 |
| XP_002885289 hypothetical protein ARALYDRAFT_479418 [Arabidopsis lyrata subsp. lyrata] | 1719 | 2e-189 |
| NP_850613 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 1297 | 1e-140 |
| XP_002885288 oxidoreductase [Arabidopsis lyrata subsp. lyrata] | 1245 | 2e-134 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0C5H5 Gibberellin 20 oxidase 2 | 460 | 7e-045 |
| Q0JH50 Gibberellin 20 oxidase 2 | 460 | 7e-045 |
| Q39110 Gibberellin 20 oxidase 1 | 458 | 1e-044 |
| P24397 Hyoscyamine 6-dioxygenase | 453 | 4e-044 |
| Q39112 Gibberellin 20 oxidase 3 | 412 | 3e-039 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L9Z7 Putative uncharacterized protein | 1723 | 4e-190 |
| Q9LJ65 Oxidase-like protein | 1720 | 9e-190 |
| Q3E7E3 Putative uncharacterized protein At3g19010.2 | 1297 | 1e-140 |
| Q9LJ66 Oxylase-like protein | 1217 | 2e-131 |
| B9HRV6 2-oxoglutarate-dependent dioxygenase | 1212 | 7e-131 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G19010.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1721 | 4e-192 |
| AT3G19010.2 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1297 | 5e-143 |
| AT3G19000.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1217 | 1e-133 |
| AT3G19000.2 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 869 | 2e-093 |
| AT4G25420.1 GA20OX1; gibberellin 20-oxidase | 458 | 1e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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